LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre2g01690	ATGCCTAACCAAATCAATGTTTGTGTCTGTCTATCACTTGGTGGTGGTTCTTGCCACCGTTTCCCCTACGGTTGTTTAACATTTGATGAGATCCATTTAACCAAGAAAAGGAAACGTGCCCAACAAGAAACCACTCAACTTTCAACAATGACCAATGTTGATGATCAATGGGATATCAAGAAGGTCTTGAAATGGAGTGATGTATGTGGCAGTTTGAAAAGGCTTTTGTTGAATAAAGATTTGGCTTATGATCATGTAATTCCTATGTTGACGGGTGGTCTTGGAGCTGCTTACCAGAAAGGAGGAGTGACAGTTCAAATATGGGATGTTGACACAAAGTCTCTTCATTCTCTTGTTTTCAAGATATGGCCTTCTGCACCAAGTTATGTTTTCATCAAGACGTGGTTCGATGACTTTGTTCTTCGAAGGGGATTGAAGGAAGGAGATGCAATTGGTCTTCATTGGGATCAGGCAAACCAACGATTTAATTTCTCGGTTCTTAATAGCTCTTAG	513	0.4035	MPNQINVCVCLSLGGGSCHRFPYGCLTFDEIHLTKKRKRAQQETTQLSTMTNVDDQWDIKKVLKWSDVCGSLKRLLLNKDLAYDHVIPMLTGGLGAAYQKGGVTVQIWDVDTKSLHSLVFKIWPSAPSYVFIKTWFDDFVLRRGLKEGDAIGLHWDQANQRFNFSVLNSS	170

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre2g01690	170	CDD	B3_DNA	59	168	IPR003340	GO:0003677
	Trre2g01690	170	PANTHER	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	35	169	-	-
	Trre2g01690	170	SUPERFAMILY	DNA-binding pseudobarrel domain	57	167	IPR015300	-
	Trre2g01690	170	Gene3D	-	48	167	IPR015300	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre2g01690	Trre-Chr2	13714007	13714519	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre2g01690	59	156	B3 DNA Binding Superfamily	AT3G24650	32.653	4.91e-08	49.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre2g01690	-		-	tpra:123892005	239.58

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