Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01690 ATGCCTAACCAAATCAATGTTTGTGTCTGTCTATCACTTGGTGGTGGTTCTTGCCACCGTTTCCCCTACGGTTGTTTAACATTTGATGAGATCCATTTAACCAAGAAAAGGAAACGTGCCCAACAAGAAACCACTCAACTTTCAACAATGACCAATGTTGATGATCAATGGGATATCAAGAAGGTCTTGAAATGGAGTGATGTATGTGGCAGTTTGAAAAGGCTTTTGTTGAATAAAGATTTGGCTTATGATCATGTAATTCCTATGTTGACGGGTGGTCTTGGAGCTGCTTACCAGAAAGGAGGAGTGACAGTTCAAATATGGGATGTTGACACAAAGTCTCTTCATTCTCTTGTTTTCAAGATATGGCCTTCTGCACCAAGTTATGTTTTCATCAAGACGTGGTTCGATGACTTTGTTCTTCGAAGGGGATTGAAGGAAGGAGATGCAATTGGTCTTCATTGGGATCAGGCAAACCAACGATTTAATTTCTCGGTTCTTAATAGCTCTTAG 513 0.4035 MPNQINVCVCLSLGGGSCHRFPYGCLTFDEIHLTKKRKRAQQETTQLSTMTNVDDQWDIKKVLKWSDVCGSLKRLLLNKDLAYDHVIPMLTGGLGAAYQKGGVTVQIWDVDTKSLHSLVFKIWPSAPSYVFIKTWFDDFVLRRGLKEGDAIGLHWDQANQRFNFSVLNSS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01690 170 CDD B3_DNA 59 168 IPR003340 GO:0003677
Trre2g01690 170 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 35 169 - -
Trre2g01690 170 SUPERFAMILY DNA-binding pseudobarrel domain 57 167 IPR015300 -
Trre2g01690 170 Gene3D - 48 167 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01690 Trre-Chr2 13714007 13714519 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01690 59 156 B3 DNA Binding Superfamily AT3G24650 32.653 4.91e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01690 - - tpra:123892005 239.58