Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01683 ATGTCGCTGCCGGAATGTTCAGTGGACCAACTAACGCAGTTCATCGGCCCGAACGCAACAAACGCAGAAGCTGCAGCTAAGTTCATCTGCAACCAGTTCTCCGCGGTGGGAAATAAGTTCGTAGACACACAATACGCGGTGGACAACACATACCTTCTATTTTCAGCTTATCTTGTTTTCTCTATGCAACTTGGTTTTGCTATGCTCTGTGCTGGTTCAGTTAGAGCCAAAAACACTATGAACATCATGCTCACCAACGTTCTCGACGCTGCCGCCGGTGGTCTTTTCTACTATCTCTTCGGTTTCGCCTTTGCCTTTGGTGGACCGTCCAACGGTTTCATCGGAAAACATTTCTTTGGTCTTAGAGACGTTCCGACAGTAAATTTTGATTACAGTTACTTTCTTTATCAATGGGCTTTCGCCATAGCAGCCGCTGGCATCACCAGCGGCTCAATCGCTGAACGAACCCAGTTCGTTGCCTATCTTATTTACTCTTCTTTTCTCACAGGGTTTGTTTACCCTGTGGTTTCTCATTGGTTTTGGTCCAGTGATGGTTGGGCTAGCGCAACCAACACTGGAAACCTTCTATTCAGCACCGGAGTCATCGATTTTGCTGGCTCCGGTGTTGTTCATATGGTTGGTGGTATTGCTGGCCTCTGGGGAGCATTAATTGAAGGTCCGCGGATCGGACGATTTGATCATTCTGGTCGAGCCGTCGCTCTTCGCGGACACAGTGCTTCTCTTGTTGTTCTTGGTACCTTCATGCTTTGGTTTGGTTGGTATGGTTTCAACCCTGGTTCCTTCACTAAGATTCTTAGTCCTTACAACTCAGGTAACTACTATGGACAGTGGAGTGCGGTGGGTAGGACGGCGGTGACGACGACATTAGCGGGATGCACGGCGGCGCTGACAACACTTTTTGGAAAAAGAATCCTCTCCGGTCACTGGAACGTTACCGACGTATGTAATGGTTTATTAGGCGGTTTCGCCGCAATAACCGCCGGGTGCTCCGTCGTGGAACCATGGGCAGCAATAGTTTGTGGCTTTATGGCAGCGATAGTTTTGATCGCGTGCAACATACTCGCGGAAAAGATGCGTTACGATGATCCATTAGAAGCAGCGCAATTACACGGAGGATGTGGCGCGTGGGGTATAATATTCACTGCTTTGTTTGCAAAAGAAGAGTATGTGAACCAAGTTTATCCGGGTAAACCGGGTCGACCGTACGGGTTATTTATGGGTGGTGGAGGGAAGTTATTAGGGGCACATGTGATTCAAATATTGGTTATTATTGGTTGGGTTAGTGCCACTATGGGTCCTTTATTTTTTGTTTTGAATAAAATGAAGTTGTTAAGGATTTCAGCTGAAGATGAAATGGCGGGTATGGATATGACCCGACATGGTGGGTTTGCTTATGCTTATGAAGATGAGTCACACAAAAATGGGATTCAATTGAGGAAAGTTGAACATAACTCTTCTTCTACTCCAACTCCCACCACAGATTCATGA 1509 0.4685 MSLPECSVDQLTQFIGPNATNAEAAAKFICNQFSAVGNKFVDTQYAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGGPSNGFIGKHFFGLRDVPTVNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSSDGWASATNTGNLLFSTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSGRAVALRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSPYNSGNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFMAAIVLIACNILAEKMRYDDPLEAAQLHGGCGAWGIIFTALFAKEEYVNQVYPGKPGRPYGLFMGGGGKLLGAHVIQILVIIGWVSATMGPLFFVLNKMKLLRISAEDEMAGMDMTRHGGFAYAYEDESHKNGIQLRKVEHNSSSTPTPTTDS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01683 502 SUPERFAMILY Ammonium transporter 45 453 - -
Trre2g01683 502 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Trre2g01683 502 NCBIfam ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Trre2g01683 502 FunFam Ammonium transporter 29 487 - -
Trre2g01683 502 PANTHER AMMONIUM TRANSPORTER 20 475 - -
Trre2g01683 502 Pfam Ammonium Transporter Family 51 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Trre2g01683 502 Gene3D Ammonium transporter AmtB like domains 28 492 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01683 Trre-Chr2 13640997 13642678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01683 5 498 Inorganic Solute Cotransporters AT4G13510 81.710 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01683 K03320 - egt:105950262 837.795