Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01674 ATGTTAGCAGATCATGTCAATCAACTCCAGGATGCAAGAGAAAGGATTATTCATTCGGTTGAAGAAGAAAGAGCAAACGGTAAAGAAATCAAAAGAGATGTGTTGAACTGGTTGGAGAATGTGGACGAGCTCATTGAAAGGGCAAATCAGCTCATTGGAGAATGTGGTCGTGCCAATGTAAGGGGATCAACATGGGGGTTACCCAATTTGATTTTGCGTCATCAACTAAATAGGAACGCCATGAAAATTGCAAACGATGTTATTCAAGTTCTACAAAAAGGGATGTTTGATCGAATTAGTTACCTTCCAACCCTAGACGGAGTAGCCTCCTCTTCCTCATCAAGAGGTAGTGAAAATTATGAGACAAGGGAGTCACTTAAGGATGATATTTTGATGGCTCTAGCAGACCTTAATTCATGCAACATTGGGGTCTATGGTTTGGGTGGGGTGGGTAAGACCACTCTGGTTAAAGACGTGGCTCTATCAGCAAGGCAACAGAAATTGTTCGATGCAGTGGTTATAACACATGTATCCGAAAATCCAGACTTTAAAAAGATTCAAGGGGAGATTGCAGATTTGTTGGGTTTACGATTTGAGGAGGAGACTATTCTTGGCAGAGCACATCGCCTAAGAAAAAGAATCAAGATGGAGAAAAGTATTCTTGTCATTCTAGATGATATATGGACCATGCTTGATTTGGAGAGAGTGGGAATCCCATTTGGTAATGAACATAATGGTTGCAAATTATTGATGACAAGTAGAAATCAAGATGTGTTGTTGCAGATGGATGTTCCAAAGGATTTCACTTTCAAACTTGAACTTATGACTGAATACGAGACATGGAACTTGTTTCAATTTATGGCTGGGGATGTGGTTAAAGATAACAATTTGAAAGCTGTCGTAGTTCAAGTTGCTCAAAAATGTGAAGGTTTGCCTCTTAGGGTAGTGACAATAGCACGGGCAATGAGAAATAAGAGGGATGTCCAATCTTGGAAAGATGCATTAAGGAAATTACAAGGTAATGACCATCTAGACATAAGCGCGATGACTTATTCTGCTTTGGAGTTGAGTTACAACTCATTGGAGAGTGATGAAATGAGGGACAGCTTCTTGCTTTTTGCATTAATGCAAGGTAATGATGTAGAGTATTTCCTGAAAGTTGCAATGGGTTTGGAAATATTAAAGCATGTTAATACCGTGGATGAGGCAAGAAATAGATTTTACTCAATAATCAGATCTTTGGAGGCGACTTGTCTTTTGCTTGAGGTTGAAGTAGGTGGAGTGATCCAAATGCACGACTTTGTTCGTGATTTTGCTATATTCATAGCTCGTAGGGACAAACATGTATTTTTAAAAAGGTGCACACAATTTGCTCTATCCAATTATCAAAATGACGAGCTTTTTCCAATAATAATGCAAGACAATAATGTACAGTACCTTCCAGATGACCAACTTTCTATTCTATCACATCAACAATCTTCCATTGCCGAAGAGGATGACTATCGCGAGCGTTTGGATATTCTAATAAGGAGTAATAATCACTCTCTACGTGATACCACACAAGAGGTGGACGAACAAGAAGTGGACGGGGAGACAAGACTTAGTTTGTGGGTAGATGTTGCTGGGGGAATGTCTGGAGGTCAGCATTACAACACTGCTATGTCTGTTAACCTTAGGCCAAGTGTCTGTCATCTGACTCAAGAGTCTAGTCCTCCTGAAAATGAGGGGATTGAGATGCTTCGTCGGGAGGTAGCCGCAGCACTTGCAGAGGCTGCTGCAGCACGTGCAGAGGCTGCTGCAGCAAATGAAAGAGCTGCTGAAGCGAACCAACGAGCTGATGTATCTGATCAGCGTATAAAATTTTAG 1866 0.4084 MLADHVNQLQDARERIIHSVEEERANGKEIKRDVLNWLENVDELIERANQLIGECGRANVRGSTWGLPNLILRHQLNRNAMKIANDVIQVLQKGMFDRISYLPTLDGVASSSSSRGSENYETRESLKDDILMALADLNSCNIGVYGLGGVGKTTLVKDVALSARQQKLFDAVVITHVSENPDFKKIQGEIADLLGLRFEEETILGRAHRLRKRIKMEKSILVILDDIWTMLDLERVGIPFGNEHNGCKLLMTSRNQDVLLQMDVPKDFTFKLELMTEYETWNLFQFMAGDVVKDNNLKAVVVQVAQKCEGLPLRVVTIARAMRNKRDVQSWKDALRKLQGNDHLDISAMTYSALELSYNSLESDEMRDSFLLFALMQGNDVEYFLKVAMGLEILKHVNTVDEARNRFYSIIRSLEATCLLLEVEVGGVIQMHDFVRDFAIFIARRDKHVFLKRCTQFALSNYQNDELFPIIMQDNNVQYLPDDQLSILSHQQSSIAEEDDYRERLDILIRSNNHSLRDTTQEVDEQEVDGETRLSLWVDVAGGMSGGQHYNTAMSVNLRPSVCHLTQESSPPENEGIEMLRREVAAALAEAAAARAEAAAANERAAEANQRADVSDQRIKF 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01674 621 Pfam NB-ARC domain 129 347 IPR002182 GO:0043531
Trre2g01674 621 Gene3D - 106 267 IPR027417 -
Trre2g01674 621 PRINTS Disease resistance protein signature 214 228 - -
Trre2g01674 621 PRINTS Disease resistance protein signature 308 322 - -
Trre2g01674 621 PRINTS Disease resistance protein signature 141 156 - -
Trre2g01674 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 371 IPR027417 -
Trre2g01674 621 Coils Coil 577 618 - -
Trre2g01674 621 Gene3D - 275 362 IPR042197 -
Trre2g01674 621 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 3 470 - -
Trre2g01674 621 SMART AAA_5 138 455 IPR003593 GO:0016887
Trre2g01674 621 Coils Coil 6 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01674 Trre-Chr2 13588350 13591863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01674 142 412 WRKY Transcription Factor Family AT5G45050 25.517 6.53e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01674 - - mtr:25482804 677.552