Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01627 ATGGAAAATTCAAATTTTGCTACAAACAATGTCAATGAACCATTAGGGAGTAATGGCAAATCTCCTGTGATTTTGAATTCTAATGTTAAATGGAATGATAACATTGAGCATGAACTAATTGAAGAAGACATAATTCCATATGTGGGCATGAAGTTTGATACGGAAGATCACGCATATAGATTTTATAATGTATATGTTGGCTTTGCTGGTTTTAGCATTAGAAAAGATTGGAGAAACAAAAGCAAATTAGATAAAAAGACAGTGATGTCTCGAAAGTTTGTGTGTTTTAAAGAAGGCTTCAAGAAGATCAAAGAATATGATGATAAAGTGTCTCGTAAAGATATCAGAACTGGATGTTTAGCACATGTTGTCATCGGTCGGGAATTGAGTGGAAACTATGTTGTTACATCTTTCGTAAAAGACCATAATCATGAGCTTGCATCCCCTAGAAGTAAGCATAAATTACCATCACAAAGGAGGGTTTCTGCCGCTCAAGCAGCTGAGGTAGAAATGGCAAACCGATCTGGTATACGCCAAAAATTGATTTTTGAGTTTATAAGTCAACACGTTGGAGGGAGGGAGAATGTTGGTTGCACTTCTAAAGATATTAGCAATCATTTAACTGCCAAGAGGATGAAGGAAATGAAGGAAGGTGAAGCATATACTCTACTTCATTATTTTAAATCAAAGCAAACTGAGAATCAATCATTCTTTTATGATATTCAACTTGATGTTGATAATCAAATAACTAACATTTTCTGGGCAGATGCTAAAATGGTTTTGGATTATGTTTATTTTGGAGATGTAGTGTGTTTTGATACGACATACCGCACTAATAAGAATTTACGACCATTTGCTCCTTTCATTGGATTCAACCATCATAAAGAAAGTGTGTTATTTGGTGCAGCACTGTTATATGATGAAACTGCTGCATCATTTGAGTGGTTGTTCAAGACTTTTCTTAAGGCAATGTGTGGAAAGAAGCCGAAGACAATTTTCACAGATCAAGATCCTGCCATGGCAAAAGCAATATCAGAAGTTTTTCCTGAAACATATCATCGTTTATGCTTGTGGCATTTATTTCAGAATGCACTTAAAAATGTTAATCATGCCTTTAAAAGATCAGATTCTTTTGCTACAGATTTGAGAAGTTGCATTTATGATTTTGAGTATGAGGATGACTTTCTTACTGCTTGGAATTCATTACTTGACAAGCACAACCTTCACCAAAATAAATGGATGCAAGATTTGCTTAAGAAAAAGGAAAAATGGGCTTTAGTATATGGACGGAACACGTTTTCTGCTGGTGCTACAACAACACAATTAAGTGAGAGCTTCAATGGTCGTTTAAGGCTTTACATGAAGTCCACTTATAACGTGTTGGAGTTTTTCAGACACTTTGAAAGATTGATAGAGGACATGCGTTATAAGGAGATTGAGTCTAACTATGAAATGAGTCAGAAGATGCCATCATTAAATATGAATATCATGTTACTCAAAACCGCAAGAGATGTCTACACACCAACAATTTTTTCTCTAGTTCGTGGAGAATATGAAAAGTCTTGTAATCTTCTTTTGAAGAGTTGCACTCAGAACTTGCAATTATATGAATATGAAGTGAGTTTTTTTGCGAACATGAGGCAACATAAAGTTACATTCAACTCTGAAGATCAAAGTGTTGAGTGCAGTTGTCGACTTTTTCAATTCATTGGCATCCTTTGTTGTCATGCTCTTCGAGTACTTAATCATCTGAATGTAATTGTTATTCCCCAAAAATACATATTGAAAAGGTGGACTAAGCAAGCTCGAAGTGGTTGTGTGCTAGACAATAAGGGACAAATTATTAAAGAAGATCCAAAGTTGGTTGTGTCAAATCGCTTAAGAGATCTATGTCGCACTTCAGTCGGAATATCAAGCAAGGCTGCTGAATCTGGAGAAGCTTCAGCATTTTTAGCAAGAAAATTGATGGAAGCTGACATTGAAGTTGATAAAATCTTAAGCAAAAGATCTTCCACACAAACAACAAATATTGGTGATGTAAATAGTCAAACCAATGAGATAGTAACAGATGATATTACAACTGCATCACAAGCCATTGGTATAAAAAAGAAAGATGGTACATCACGGTTAAAAGGCAGACCAAAGAGTTGTGTGGAGAAAAAATACAAAAGATGCAAAGGCACTCCCAAGTGTAGTTCTGTGACACAAAATTATTCAACCACGTCCATGCCAATTATGCAGAATTTTCCATTTTCACATAGATACCAAGAACTAGTAGTAGCTGGTATTAATACAACACAGTTTAATGACAAGAATAAGGAAAATGGAGAACACATGGAAGAATTTGGTTTTTCTACTTATGCTTATCAAGGGCAAGAACATCTAAGTCAAAGTCCGGTGTTGAACTCAACGAATGTAGAGCTTGAGGAACCATCTGCAGAGCTTCAACCAAGTCCTTCGGAATTTAACCAACATGATGGCTTAACATCTTGGGAAGGAAACAAGGAAACCAACTAA 2517 0.356 MENSNFATNNVNEPLGSNGKSPVILNSNVKWNDNIEHELIEEDIIPYVGMKFDTEDHAYRFYNVYVGFAGFSIRKDWRNKSKLDKKTVMSRKFVCFKEGFKKIKEYDDKVSRKDIRTGCLAHVVIGRELSGNYVVTSFVKDHNHELASPRSKHKLPSQRRVSAAQAAEVEMANRSGIRQKLIFEFISQHVGGRENVGCTSKDISNHLTAKRMKEMKEGEAYTLLHYFKSKQTENQSFFYDIQLDVDNQITNIFWADAKMVLDYVYFGDVVCFDTTYRTNKNLRPFAPFIGFNHHKESVLFGAALLYDETAASFEWLFKTFLKAMCGKKPKTIFTDQDPAMAKAISEVFPETYHRLCLWHLFQNALKNVNHAFKRSDSFATDLRSCIYDFEYEDDFLTAWNSLLDKHNLHQNKWMQDLLKKKEKWALVYGRNTFSAGATTTQLSESFNGRLRLYMKSTYNVLEFFRHFERLIEDMRYKEIESNYEMSQKMPSLNMNIMLLKTARDVYTPTIFSLVRGEYEKSCNLLLKSCTQNLQLYEYEVSFFANMRQHKVTFNSEDQSVECSCRLFQFIGILCCHALRVLNHLNVIVIPQKYILKRWTKQARSGCVLDNKGQIIKEDPKLVVSNRLRDLCRTSVGISSKAAESGEASAFLARKLMEADIEVDKILSKRSSTQTTNIGDVNSQTNEIVTDDITTASQAIGIKKKDGTSRLKGRPKSCVEKKYKRCKGTPKCSSVTQNYSTTSMPIMQNFPFSHRYQELVVAGINTTQFNDKNKENGEHMEEFGFSTYAYQGQEHLSQSPVLNSTNVELEEPSAELQPSPSEFNQHDGLTSWEGNKETN 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01627 838 MobiDBLite consensus disorder prediction 801 838 - -
Trre2g01627 838 Pfam FAR1 DNA-binding domain 60 147 IPR004330 -
Trre2g01627 838 SMART 26again6 560 587 IPR006564 GO:0008270
Trre2g01627 838 Pfam SWIM zinc finger 562 585 IPR007527 GO:0008270
Trre2g01627 838 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 660 IPR031052 GO:0006355
Trre2g01627 838 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Trre2g01627 838 Pfam MULE transposase domain 269 363 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01627 Trre-Chr2 13140671 13144189 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre2g01627 MULE 1e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01627 - K17604 qsu:112016759 899.042