Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01617 ATGGGCAAAATCAAGCTTCAGGCACTTCTCTTCTCTGCTTGCTCGAACCCTAGTTCTCAATTTCAGGACGGTATACCTGAACCTGCACTGGGATTTAACTCTGTTGGTGGCAATTCTTCTTCTCTGGTTCTCAATTTTTTTAAGGGAGGAACTATGGTGACATATGGTGGAATGTCTAAAAAACCTGGCACCGCATCAACTTCAGCCTTCATATTTAAGCTAACAATAAATTCTGGAGGGGTTTCTTCCTTTGCCCTTTTCAATGTCCATGGGAGTGATGATGCATCTCTAAAAGAAGCAGCAGCTGTCATAAAGTTATCTTCATCGAGAATGGCAACACAGTCCGAATGTCTCGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACGCCACAGGCTAGAGTCATTCACAATACCAGTTCAGAATGGCTCCAAATAAAAGAAGCTGCAGAAAAAGCAAGGGATGCAGCAAGTTTTGAGCGTGATGCAATTGGTGAAACAACATGTTCAGAGCTTTTGGAAGCACTTGAGCTTAGTCGGTGTCTCTTGTTTATGAGGTACAATTCAAACCTAGTTTTAATAATGGATGAGATGATGCGTGGTCAAAGAGGATGGAGGGAGTTATCAATCTTGGGAGATAAAATGAACATGTTTAGTGGGATGATAGAAGGGTTGATTTGGTCTCCACAAAGCAACAATGGTATTAGCCGAGCTGATGATTGGGCTTTTGAGGAGGTCGAAGTGCGAAAGATAATTTATTGTTCAGTGTTCACTGAAGTGACTGAGGGTATGAATTCTTATGGTGTTACTCGGCATCCCCATGACAAAGAGTGCACTAGACCAAATGGACTGGATTGA 858 0.4242 MGKIKLQALLFSACSNPSSQFQDGIPEPALGFNSVGGNSSSLVLNFFKGGTMVTYGGMSKKPGTASTSAFIFKLTINSGGVSSFALFNVHGSDDASLKEAAAVIKLSSSRMATQSECLGYEFAKWLGVQTPQARVIHNTSSEWLQIKEAAEKARDAASFERDAIGETTCSELLEALELSRCLLFMRYNSNLVLIMDEMMRGQRGWRELSILGDKMNMFSGMIEGLIWSPQSNNGISRADDWAFEEVEVRKIIYCSVFTEVTEGMNSYGVTRHPHDKECTRPNGLD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01617 285 Gene3D - 22 76 - -
Trre2g01617 285 Pfam Actin-fragmin kinase, catalytic 89 213 IPR015275 -
Trre2g01617 285 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 22 74 IPR036291 -
Trre2g01617 285 SUPERFAMILY Protein kinase-like (PK-like) 70 212 IPR011009 -
Trre2g01617 285 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 72 189 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01617 Trre-Chr2 13054340 13057656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01617 72 187 Protein tyrosine phosphatase (PTP) family AT5G23720 69.828 1.47e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01617 K14165 - jre:109000311 167.548