Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01611 ATGTCAGGAGAACTAGGAGTGCTAAATGCACTTGATGTGGCAAAGACACAATTGTACCATTTCACTACAATTGTCATAGCTGGAATGGGTTTCTTCACTGATGCATATGATCTTTTCTGCATATCTCTTGTGACAAAATTACTAGGAAGAATATATTACACAGAACCAAATGCACCAAAACCAGGAACACTTCCACCAAGTGTTCAATCAGCTGTTACCGGCGTCGCGCTAGTCGGAACTCTAGCAGGCCAATTGTTCTTTGGTTGGCTTGGAGACAAAATGGGAAGAAAAAAAGTTTATGGTTTAACACTTATTCTCATGGTTGTTTGTTCTGTTGCTTCAGGACTCTCTTTTGGATCAAGTCCAAAGAGTGTTATGGCAACACTTTGTTTCTTTAGGTTTTGGCTTGGTTTTGGAATTGGTGGTGATTATCCTCTTTCAGCTACAATCATGTCTGAATATGCAAATAAAAAAACTAGAGGAGCTTTTATAGCTGCTGTTTTTGCTATGCAAGGTTTTGGTATCTTAGGTGGTGGAATTATTGCATTGATTGTGTCTTCTATATTTGATCACAAATATAATGTTCCTACTTATGAAGAAAATGCAGCAGCGTCGTTGGTGTTGCCGCAATTTGATTATGTTTGGAGACTTATTCTTATGTTTGGTGCTCTTCCGGCTGCATTGACGTACTATTGGCGAATGAAAATGCCCGAAACGGCTCGTTACACGGCTCTTGTTGCTAAGAATGCGAAACAGGCTACTGCGGATATGTCGAAGGTTTTGCAAGTTGAACTTGAAGTTGAAGAGGAAAAGGTGCAAAAGATTGCTGGTGGTGATAGAAATCAGTATGGCTTGTTCAGCAAGGAATTCGCAAAGCGACACGGTTTGCATTTGCTTGGAACAACTAGTACTTGGTTTTTGTTGGATATTGCTTTCTATAGTCAGAATCTTTTCCAAAAGGATATTTTTTCCGCAATTGGATGGATCCCTCCGGCGAAAGAAATGAATGCAATTCATGAGGTTTACAAGATTGCAAGAGCACAGACACTTATTGCATTGTTTAGCACTGTTCCGGGTTATTGGTTCACGGTAGCGTTTATCGATCACATGGGCCGTTTTGCTATCCAAATGATGGGATTCTTCTTCATGACTGTTTTCATGTTTGCTCTTGCTATACCATATGATCATTGGAAAAATAGTGACAGAAAAATTGGGTTTGTTGCAATGTACTCACTCACATTCTTCTTTGCTAATTTTGGTCCAAATTCTACAACATTTGTTGTTCCGGCAGAGATTTTCCCGGCTAGGTTAAGGTCCACTTGTCATGGAATTTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTTGGTGCATTTGGTTTCTTGTATGCTGCACAAAGTAAAGATCCTACTAAGACCGATAAAGGATATCCAACCGGTATTGGGATTAAGAACTCGCTTATTATGCTTGGTGTGATCAACTTTGCTGGGATGTTGTTCACTTTACTTGTTCCGGAATCGAAGGGAAAATCATTGGAGGAGTTAACCGGAGAGAATGAAGCAGAAGGTGATGTTGAGGCCACTCGTCAAGAAGCATAA 1596 0.4035 MSGELGVLNALDVAKTQLYHFTTIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTEPNAPKPGTLPPSVQSAVTGVALVGTLAGQLFFGWLGDKMGRKKVYGLTLILMVVCSVASGLSFGSSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILGGGIIALIVSSIFDHKYNVPTYEENAAASLVLPQFDYVWRLILMFGALPAALTYYWRMKMPETARYTALVAKNAKQATADMSKVLQVELEVEEEKVQKIAGGDRNQYGLFSKEFAKRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKEMNAIHEVYKIARAQTLIALFSTVPGYWFTVAFIDHMGRFAIQMMGFFFMTVFMFALAIPYDHWKNSDRKIGFVAMYSLTFFFANFGPNSTTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKTDKGYPTGIGIKNSLIMLGVINFAGMLFTLLVPESKGKSLEELTGENEAEGDVEATRQEA 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01611 531 MobiDBLite consensus disorder prediction 512 531 - -
Trre2g01611 531 CDD MFS_PhT 24 507 - -
Trre2g01611 531 NCBIfam phosphate:H+ symporter 10 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
Trre2g01611 531 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 511 - -
Trre2g01611 531 SUPERFAMILY MFS general substrate transporter 11 514 IPR036259 -
Trre2g01611 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Trre2g01611 531 FunFam Inorganic phosphate transporter 1-6 19 528 - -
Trre2g01611 531 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre2g01611 531 Gene3D MFS general substrate transporter like domains 273 530 IPR036259 -
Trre2g01611 531 Gene3D MFS general substrate transporter like domains 19 266 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01611 Trre-Chr2 13008361 13009956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01611 4 521 Inorganic Solute Cotransporters AT5G43360 80.888 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01611 K08176 - gmx:100780201 900.582