Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01593 ATGAATCTTGTTGCTGCTGGAAAATTCAAAATTATCAGGAAAATTGGGAAAGGAACATTTTGTGACATTTATTTAGGTGTTGATGTGGAAACTCAAGAGAAAGTGGCTCTTAAGCTGGAACCTGTGAATACAAAGCATCATCCTCATCTTCTCTTTGAGTCCAAAGTGTATGAGCTTCTTCAAGGAGAAACCGGCATACCTCGTATAAAGTGGTATGGAGTCGAGGGTGACTACAATATCCTGGTTATTGACCTTCTTGGACCGAGTCTCGAAGACTTGTTTAACCATTGCGGTAGAAATTTCTCTCTGAAAACAGTGTTGATGCTTGCAGATCAACTAATAAACAGAATAGAGTATATGCACTCCTCGGGCTTTCTGCATCGTGATATAAAGCCCGAAAACTTTTTAATGGGTTTAGATCCCGAGATAAATCAGCAGGAAAAACAAGAATCTCACTGGAACTGGTTGATATGCAAGTGTTAA 483 0.3934 MNLVAAGKFKIIRKIGKGTFCDIYLGVDVETQEKVALKLEPVNTKHHPHLLFESKVYELLQGETGIPRIKWYGVEGDYNILVIDLLGPSLEDLFNHCGRNFSLKTVLMLADQLINRIEYMHSSGFLHRDIKPENFLMGLDPEINQQEKQESHWNWLICKC 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01593 160 Gene3D Transferase(Phosphotransferase) domain 1 87 152 - -
Trre2g01593 160 SUPERFAMILY Protein kinase-like (PK-like) 6 140 IPR011009 -
Trre2g01593 160 Pfam Protein kinase domain 9 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01593 160 ProSiteProfiles Protein kinase domain profile. 9 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01593 160 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Trre2g01593 160 PANTHER CASEIN KINASE-RELATED 13 144 - -
Trre2g01593 160 SMART serkin_6 9 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01593 160 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01593 Trre-Chr2 12852440 12854358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01593 1 137 CBL-interacting serine-threonine protein kinases AT4G24400 29.452 3.87e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Trre2g01593 Pkinase 2.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01593 K08960 - fve:101293150 209.92