Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01592 ATGAATCTTGTTGCTGCTGGAAAATTCAAAATTATCAGGAAAATTGGGAAAGGAACATTTTGTGACATTTATTTAGGTGTTGATGTGGAAACTCAAGAGAAAGTGGCTCTTAAGCTGGAACCTGTGAATACAAAGCATCATCCTCATCTTCTCTTTGAGTCCAAAGTGTATGAGCTTCTTCAAGGAGAAACCGGCATACCTCGTATAAAGTGGTATGGAGTCGAGGGTGACTACAATATCCTGGTTATTGACCTTCTTGGACCGAGTCTCGAAGACTTGTTTAACCATTGCGGTAGAAATTTCTCTCTGAAAACAGTGTTGATGCTTGCAGATCAACTAATAAACAGAATAGAGTATATGCACTCCTCGGGCTTTCTGCATCGTGATATAAAGCCCGAAAACTTTTTAATGGGTTTAGATCCCGAGATAAATCAGGAAAAACAAGAATCTCACTGGAACTGGTTGATATGCAAGTGTTAA 480 0.3917 MNLVAAGKFKIIRKIGKGTFCDIYLGVDVETQEKVALKLEPVNTKHHPHLLFESKVYELLQGETGIPRIKWYGVEGDYNILVIDLLGPSLEDLFNHCGRNFSLKTVLMLADQLINRIEYMHSSGFLHRDIKPENFLMGLDPEINQEKQESHWNWLICKC 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01592 159 Gene3D Transferase(Phosphotransferase) domain 1 87 153 - -
Trre2g01592 159 PANTHER CASEIN KINASE-RELATED 13 144 - -
Trre2g01592 159 SMART serkin_6 9 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01592 159 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Trre2g01592 159 SUPERFAMILY Protein kinase-like (PK-like) 6 140 IPR011009 -
Trre2g01592 159 Pfam Protein kinase domain 9 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01592 159 ProSiteProfiles Protein kinase domain profile. 9 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01592 159 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01592 Trre-Chr2 12852440 12854358 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01592 1 137 CBL-interacting serine-threonine protein kinases AT4G24400 29.452 3.77e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Trre2g01592 Pkinase 2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01592 K08960 - twl:119991826 209.92