Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01575 ATGGGAATTAGAGATTTTCGTTTCAAAGTCAAGGCATTTAGGGTGAAATTTTTATGCTTAGGAAATAGAAGCATAAGAAGAAATCATGTAAGTGCAAGCAAGCCTTCATGGATGATGCCAATATCACATGGTCATTATGTGGTGGAGCATGATGTGATTAAAGATGATTCTGAAGACTCTGAGTTTGATTCAGTTGTGATACAAAGAGAGCAAATTGGTGAAACTGAATTGTGGTATTTTGGAATCTTTGATGCTTTGATTGGAGATTGTGTTACCAAATATTTGCAATCCAATTATTTTGACAAGAATCTCAAAGAGTCTCAATTGAGGAGAAAAGCCAAAGAAACACTCAAGAGAGCATACCTAGGTGCAAAAACAAAGGTGAGAGAGGCAAACAAATCAGAGGAAACATGCATAATAGGTTCAACATCAGTGATAATAATAAATGGAGAAAAACTTGTGCTAGCCAACATTGGAGATTACAGAACTGTTTTGTGTAAAGATGGTGTAGCTTATCAGACAAATGGAAGATACAATCAATCATCCAAAAAACGTTGGTATCGCAGACTTTTTTCAGGTGAATCAGGTAATGCAACAAGCACAAAGTATTCCAAAGCTTTAGAACTTGTGGTTGGAGGTTATTGGATTGACTCTAGTACTGAATTTGTGATCTTGGCAAGCAATGGCATATGGGAGGTGATGAAGAACCAAGAGGCAGTAAATCTTATCAGACACATAGAGGATCCACAAGAAGCAGCTGAGTGTTTGGCTAAGGAAGCATTGGTTAGGAGGAGCAAAAGCAACATTTCATGTTTAATCATTCGATTTGATTGA 834 0.3693 MGIRDFRFKVKAFRVKFLCLGNRSIRRNHVSASKPSWMMPISHGHYVVEHDVIKDDSEDSEFDSVVIQREQIGETELWYFGIFDALIGDCVTKYLQSNYFDKNLKESQLRRKAKETLKRAYLGAKTKVREANKSEETCIIGSTSVIIINGEKLVLANIGDYRTVLCKDGVAYQTNGRYNQSSKKRWYRRLFSGESGNATSTKYSKALELVVGGYWIDSSTEFVILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALVRRSKSNISCLIIRFD 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01575 277 Gene3D - 208 277 IPR036457 -
Trre2g01575 277 PANTHER PROTEIN PHOSPHATASE 55 275 IPR015655 GO:0004722|GO:0006470
Trre2g01575 277 Pfam Protein phosphatase 2C 57 172 IPR001932 -
Trre2g01575 277 Pfam Protein phosphatase 2C 216 269 IPR001932 -
Trre2g01575 277 Gene3D - 45 193 IPR036457 -
Trre2g01575 277 ProSiteProfiles PPM-type phosphatase domain profile. 59 276 IPR001932 -
Trre2g01575 277 SMART PP2C_4 41 274 IPR001932 -
Trre2g01575 277 CDD PP2Cc 63 276 IPR001932 -
Trre2g01575 277 SUPERFAMILY PP2C-like 66 277 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01575 Trre-Chr2 12700324 12703393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01575 1 276 PP2C-type Phosphatase Gene Family AT3G23360 45.907 3.97e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01575 K19704 - gmx:100794054 401.749