Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01536 ATGGATAATCCAAAAAATTCTTCACAAAAAGATTTTCCAATAGGATTAGACGAAGAATCAGAAGAACAATATTCACTTCACTCTAATTTACTTCAACAATTCGCCACAATCTCTTCCATCGATAAGGCATGGATTTTCAATTCAAACAAAGATTCTTCTTCACAGGGATTGATGTTTTCTGTGAGTCAACCGAATCTTCTAGCGAACAAGAGACGGAAGTTTATTCTGTCTTCTACGGTTACTAAACGGAGTGATGACGGTTCCGTTACGTTACAGTGGGCTCCGTTTCCGGTTGAGGTGTCTGGAGTTTCCGTTATGGTTCCGTCACCTTCTGGTTCGAAGCTTTTGATTGTTCGAAATGCTGAGAGTGATGGTGCTTGTAGGTTTGAAATTTGGAGCGGTTCTTGTCTTGAAAGGGAGTTTCATGTACCTCAATCCAAACATGGTTCTGTGTATACTGATGGATGGTTTGAGGGAATCTCTTGGAACTCGGATGAAACTCTTATAGCATATGTTGCTGAAGAGCCTTCCCCTGCAAAGCCTACATTCAATGATCAGGGCTACAAGAAAAGTGGTTCTGATGACAAGGATTCCAGCAGCTGGAAAGGTCAAGGAGATTGGGAGGAAGATTGGGGTGAAACATATGCGGGAAAGAGGCAGCCTGCACTTTTTGTTATAAACATCACTAGTGGAGAGGTTCAGGCTGTCAAAGGAATTGACAAATCTTTGAGTGTTGGCCAAGTTGTGTGGGCTCCATCAAATGAAGGCTCTGCACAATATTTAGTCTTTGTTGGATGGTCATTTGAGACAAGAAAACTTGGTATTAAGTACTGCTATAACAGGCCTTGTGCATTATATGTTATTAAAGCGCCACACAAGTCAAAAACTAATGAGAATGACTCAACTGAAGATGCTCAGGCGCTTAACCTAAATCAAACCATAAGTAGTGCTTTTCTTCCACGGTTCAGCCCAGATGGAAAGTTTCTTGTATTTTTATCAGCAAAAAGTTCAGTTGATTCTGGAGCCCATTCTGCTACAAATTCACTTCATAGAATTGACTGGCCCAAGGAAGTGAAGTTTGATCAATCTGCAAAAGTTCATGATGTGATACCAGTTGTGCTGTGTGCTGAGGATGATGGCTTTCCCGGGCTTTACTTTTCAAGTATCCTTAACAATCCATGGCTTTCTGATGGCCACACTTTGGTTATACCCTCTGTCTGGCACAGCAGTCAAGTTTTACTTTCTGTCAATGTGTTGAGCGGACAAATAAAACGGATCACTCCTGATGGCTCAAATTTCTCATGGAGTCTCCTTACATTGCATGGGAACACTATTTTTGCTGTTTCTAGCAGTCCAGTAGATATTCCTCAAGTCAAGTATGGAACCTTTGTTGAGAAGGAAGCTGGTAATAATGAATGGAGTTGGTCAGATGTATCAAATCCCATATATAAATGCTCTGACAAGGTAAGTTCTTTGTTGTCCTCTCTTACGTTTAGTGTAATGAAGATCTCAGTCAAGGATGCTTCTGAGAACTCAACTAAAGGTTCTAGTAAACCCTATGAAGCTATATTTGTGTCATCAAAAACTAAGAAAAGTGACACATGTGATCCACTAATTGTGGTCCTTCATGGGGGACCACACTCTGTCTCGTTGTCAAGCTTTTCAAAGTCACATGCTTTTCTTTCTTCACTTGGATATAGCTTGTTGATTGTCAACTACAGAGGTTCATTGGGATTTGGTGAGGAAGCCTTACAATCTCTTCCGGGGAATGTTGGATCTCAGGATGTCAATGATGTACTCACAGCTATTGATCATGTCATAGACTTGGGACTTGCAAGTCCATCAAAAATTGCGGTGCTTGGTGGTTCACATGGTGGCTTTTTGACAACCCACTTGATTGGCCAGGCACCAGAGAAGTTTGTTGCAGCAGCTGCTAGAAATCCTGTTTGTAACCTTGCGCTGATGGTTGGTACAACTGATATCCCTGATTGGTGCTATGTTGAGAGCTATGGAATCAAAGGAAGAGATAGGATTACTGAAGCACCTTCAGCAGAGGATCTAACTCTATTTTATAGCAAGTCTCCTATTGCCCACATCGCAAAGGTAAAAACACCAACAGTTTTTCTATTAGGTGCCCAAGATCTTCGCGTCCCAATTTCAACTGGACTGCAATATGCTCGGGCTTTAAAGGAGAAAGGAGTCCCGGTTAAAGTTATCCTATTTCCAAATGACGTTCATGGAATTGAAAGGCCACAATCCGACTTTGAAAGCTTCCTCAGCATTGCTGCCTGGTTCAACAAGTATTGCAAATGA 2313 0.4155 MDNPKNSSQKDFPIGLDEESEEQYSLHSNLLQQFATISSIDKAWIFNSNKDSSSQGLMFSVSQPNLLANKRRKFILSSTVTKRSDDGSVTLQWAPFPVEVSGVSVMVPSPSGSKLLIVRNAESDGACRFEIWSGSCLEREFHVPQSKHGSVYTDGWFEGISWNSDETLIAYVAEEPSPAKPTFNDQGYKKSGSDDKDSSSWKGQGDWEEDWGETYAGKRQPALFVINITSGEVQAVKGIDKSLSVGQVVWAPSNEGSAQYLVFVGWSFETRKLGIKYCYNRPCALYVIKAPHKSKTNENDSTEDAQALNLNQTISSAFLPRFSPDGKFLVFLSAKSSVDSGAHSATNSLHRIDWPKEVKFDQSAKVHDVIPVVLCAEDDGFPGLYFSSILNNPWLSDGHTLVIPSVWHSSQVLLSVNVLSGQIKRITPDGSNFSWSLLTLHGNTIFAVSSSPVDIPQVKYGTFVEKEAGNNEWSWSDVSNPIYKCSDKVSSLLSSLTFSVMKISVKDASENSTKGSSKPYEAIFVSSKTKKSDTCDPLIVVLHGGPHSVSLSSFSKSHAFLSSLGYSLLIVNYRGSLGFGEEALQSLPGNVGSQDVNDVLTAIDHVIDLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTTDIPDWCYVESYGIKGRDRITEAPSAEDLTLFYSKSPIAHIAKVKTPTVFLLGAQDLRVPISTGLQYARALKEKGVPVKVILFPNDVHGIERPQSDFESFLSIAAWFNKYCK 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01536 770 Gene3D alpha/beta hydrolase 514 768 IPR029058 -
Trre2g01536 770 Pfam Prolyl oligopeptidase family 553 769 IPR001375 GO:0006508|GO:0008236
Trre2g01536 770 FunFam Acylamino-acid-releasing enzyme 509 769 - -
Trre2g01536 770 SUPERFAMILY DPP6 N-terminal domain-like 92 453 - -
Trre2g01536 770 ProSitePatterns Prolyl endopeptidase family serine active site. 598 628 IPR002471 GO:0004252|GO:0006508
Trre2g01536 770 MobiDBLite consensus disorder prediction 189 207 - -
Trre2g01536 770 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 16 769 - -
Trre2g01536 770 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 21 293 IPR045550 -
Trre2g01536 770 MobiDBLite consensus disorder prediction 177 207 - -
Trre2g01536 770 SUPERFAMILY alpha/beta-Hydrolases 530 769 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01536 Trre-Chr2 12263897 12272113 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01536 537 753 Carbohydrate Esterase AT5G36210 27.189 2.43e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01536 K01303 - gmx:100803600 1202.19