Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01534 ATGGCAACCATTGAGGAAGAACACTATGCTTATTTCTCCAACTTACTTCAACACTTTACCAATATTCCTAACATTAAAAAAGCATGGTTTTTCAACTCAAACACACTAGCAATGTTTTCTATTAACCAACCTGATCTTTTAACAAACAAGACCAAGACTTTGATTCTGTCCTGTAATGTTGTTAAACAAGAAAATGATGGTTCTGTTGTTGAGTTTCTATGGACTCCATTTCCAATTGAGATGTATGGTGTTGTTTCTATGATTGTTCCTTCTCCTTCTGGTTCTAAGCTTTTGGTGATTCGGAATCATGAGAAGGAAGAAGGAGTTTCTTGTTGTTTTGAGATTTGGAGTTGTTCTTGCTTGGAGAAGGAGTTTCATATCCCTCAATCATTGCATGGATTAGTATATAATGATGGATGGTTTGAGGGTGTCTCTTGGAACTTCGACGAAACAATGATAGCATATGTAGCAGAAGAGCCCTCTCCTACAAAGCCAGTATTTAGTAATATGGGCTACAAGAAAGGTGGTTGTTCTGAGGAAGATTTCGGTAGCTGGAAAGGTCAAGGAGACTGGGAGGACGATTGGGGAGAAACATATTCTGCAAAGCGACGGCCTACACTATTTGTTATCAACATCAATAGTGGAGAGGTACAAGCTGTGAAAGGAATCGACAAATCATTGAGCGTTGGCCAAGTTGTGTGGGCTCCATTTACCGAAGGCTCGGAACAATATCTTGTTTTTGTTGGGTGGTCATCTGAGAAAAGAAAGCTTGGTATGAAGTACTGCTCTAACAGGCTGTGTGCATTGTATGCTGTTAAAGCACTATATCACGAGTCAAAATCCGATGAACCAGAGCGCCACTCTTCAACTGAAGAATTGTATGCACTGAACCTAACTCCGACAATAAGCAGTGCGCTTTTTCCGCGATTCAGTCCAAATGGAGAGTTTCTTGTATTTTTATCTGCAAAATGTGCTGTGGATTCTGGAGTGCACAATGCTACAAATTCACTTCATAGGATTGATTGGCCAACTGATAGAAAACTCTACCAATCTGCCAAAATTTATGACATTATTCCTGTTGTAATGTGTGCCGAGGAGGGTTGTTTCCCCGGACTCTATTGTACATCTATCCTTAATAATCCTTGGCTTGCTGACAACTGCACAATGATCTTATCATCCATCTGGCACAGCTGTGAAGTTCTACTCTCTGTGAATGTGTTGAGTGGGGAAGTAATACGTATCACACCAGCAGACTCGAGTTTCTCGTGGAATCTTCTTGCACTTGATGGGAACAATGTTCTTGCCATTTCTAGTAATCCAGTTAATGTTCCTCAAATTATGTATGGAAATGTTATTGAGAAGAAGAGAAATACCATATGGAGTTGGTCTAAGATATCGAGTTCCATATTCAAATGCTCCGACAAGGTTAGATCTTCGCTGTCCTCTCTCCAGTGCAGTATACTGAAGATCTCCGTCACAGATGCTTCTAATGATCCAACAAAAGGTTCTGCTAAACCTTTTGAAGCTATATTTGTGACATCGAAAACCAAGAACAAGGATATATTTGATCCATTAATTGTAATCCTTCACGGAGGGCCACAGGACGTGTCTTTGTCACACTTCTCGACGTCTTGGGCGTTTCTATCTTCAGTCGGATACAGCTTGCTTGTTGTAAATTACAGAGGTTCATTAGGATTTGGTGAGGAAGCATTACAATCTCTTCCAGGGAAAGTTGGATCTCAGGATGTCAACGATGTTCTCTCCGCGATAGATCATGTGATCAACTTGGGACTTGCTAGTCCGTCCAAGATTACGGTGATGGGAATTTCACATGGCGGTTTTTTGTCGACTCATTTGATTGGCCAGGCACCAGAGAAGTTTGTAGCAGCGGCCGCAATCAATCCTGTTTGTAACTTCGCGCTGATGGTTGGTACGACTGATATTCCTGATTGGTGCTATGTAGAGGCCTTTGGTATCAATGCCAGAAATCGCTTTACGGAAGCACCTTCAGAAGAAGATTTGACTCTCTTCTATAGCAAGTCACCTATTTCGCACGTTTCAAAGGTAAAAACACCAACACTTTTCCTTTTAGGTGCTCAAGATCTTCGTGTTCCAATCTTCGATGGACTGCAATATGCTGGAGCTTTAAGAGAGAAAGGAGTCGATGCCAAAATCATTATGTTTCAAAATGATGTTCATGCACTCAAAAGGCCCCAATCTGAATGGGAATGTTTGCTTAACATTGTGGTGTGGTTCAACAAATACTGCAAATAA 2274 0.4103 MATIEEEHYAYFSNLLQHFTNIPNIKKAWFFNSNTLAMFSINQPDLLTNKTKTLILSCNVVKQENDGSVVEFLWTPFPIEMYGVVSMIVPSPSGSKLLVIRNHEKEEGVSCCFEIWSCSCLEKEFHIPQSLHGLVYNDGWFEGVSWNFDETMIAYVAEEPSPTKPVFSNMGYKKGGCSEEDFGSWKGQGDWEDDWGETYSAKRRPTLFVININSGEVQAVKGIDKSLSVGQVVWAPFTEGSEQYLVFVGWSSEKRKLGMKYCSNRLCALYAVKALYHESKSDEPERHSSTEELYALNLTPTISSALFPRFSPNGEFLVFLSAKCAVDSGVHNATNSLHRIDWPTDRKLYQSAKIYDIIPVVMCAEEGCFPGLYCTSILNNPWLADNCTMILSSIWHSCEVLLSVNVLSGEVIRITPADSSFSWNLLALDGNNVLAISSNPVNVPQIMYGNVIEKKRNTIWSWSKISSSIFKCSDKVRSSLSSLQCSILKISVTDASNDPTKGSAKPFEAIFVTSKTKNKDIFDPLIVILHGGPQDVSLSHFSTSWAFLSSVGYSLLVVNYRGSLGFGEEALQSLPGKVGSQDVNDVLSAIDHVINLGLASPSKITVMGISHGGFLSTHLIGQAPEKFVAAAAINPVCNFALMVGTTDIPDWCYVEAFGINARNRFTEAPSEEDLTLFYSKSPISHVSKVKTPTLFLLGAQDLRVPIFDGLQYAGALREKGVDAKIIMFQNDVHALKRPQSEWECLLNIVVWFNKYCK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01534 757 FunFam Acylamino-acid-releasing enzyme 496 756 - -
Trre2g01534 757 ProSitePatterns Prolyl endopeptidase family serine active site. 585 615 IPR002471 GO:0004252|GO:0006508
Trre2g01534 757 Pfam Prolyl oligopeptidase family 540 756 IPR001375 GO:0006508|GO:0008236
Trre2g01534 757 SUPERFAMILY DPP6 N-terminal domain-like 83 458 - -
Trre2g01534 757 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 5 756 - -
Trre2g01534 757 SUPERFAMILY alpha/beta-Hydrolases 524 756 IPR029058 -
Trre2g01534 757 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 6 278 IPR045550 -
Trre2g01534 757 Gene3D alpha/beta hydrolase 505 755 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01534 Trre-Chr2 12244547 12249766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01534 524 754 Carbohydrate Esterase AT5G36210 24.242 2.01e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01534 K01303 - gmx:100812681 1181.39