Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g01531 | ATGAAAACTTTCAAATTCCACCACCACTTCTTCACTCTCATTTTCTTCCTCCTCCTACCCTTCCTTAAATCACAAACTCAAAGACAACAAAACAACACAGGCTACACTTGTAACAACAAAAACCAAACAAATATTTATCCATGTCAAACCTATGCATACTACAGAGCAACACTACCAAATTACCTCGATTTAGCTACCATTTCAGACCTTTTTTCATTAAGTCGTTTAATGATCTCAAAACCAAGCAACATCACTTCACCTTCATCCCCTTTAGTCCCTAATCAACCCCTTTTAATCCCTTTAACTTGTTCTTGCAATTTCATCAACACCACTTTTGGTTCAATCTCTTACTCCAACATCACTTACACTATAAAATCAGGTGATACTTTTTTCCTTGTTTCAACCATAAACTATCAAAACCTCACTACTTATCCTTCTGTTGAAGTTGTTAATCCTAATCTTGTTGCTACTAATCTCTCTGTTGGTGATAATGTTATTTTCCCTATTTTTTGTAAATGTCCTGATAAAACCAAAACAAATTCAAGTTTCATGATTTCTTATGTTGTTCAACCTTTTGATAGTGTTTCATCAATTGCTTCAATGTTTGGAACAACTGAAAAGTCTATAGTTGATGTTAATGGTGAAAAATTGTATGATTATGATACAATTTTTGTTCCTGTTAATAAATTACCTGTTTTGAAACAACCTAGTACTATTGCTCCTTCTCCTCCACCAAGTGGAAATTTTGATGATGGTGGTGATGATGATGATAAGAGTGGAACTGTTAGAGGGTTAGCTATTGGATTGGGAATTTTAGGGTTTTTGTTGATTTTGGTTTTAGGGATTTGGTTTTATAGAGGTGTTTTTGGTAAGAAGGAAAAGAAAGGGAGAGATATGTATTTGGGAGAGAAAGGGTATAAAGGGAATAATAATAATGATAATAAGAAGAAACAAATGGATGTGAATTTTATGGCTAATGTTTCTGATTGTTTGGATAAGTATAGAGTTTTTGGATTTGATGAATTAGTTGATGCTACTAATGGGTTTGATGAAAGTCATTTGATTCAAGGGAGTGTTTATAAAGGTGTAATTGATGGACAAGTTTATGCAATTAAGAAGATGAAATGGAATGCTTATGAGGAGCTCAAAATCTTGCAGAAGGTAAACCATGGGAATTTGGTGAAGTTGGAAGGATTTTGCATAGAACCAGAAGAATCAAATTGTTATCTAGTCTATGAATATGTTGAAAATGGATCTCTCTACTCATGGCTACATGAAGAGAAAAACCAAAAGCTAAATTGGATAACAAGGCTAAGAATAGCCATTGACATTGCCAATGGTTTATTATACATTCATGAACACACAAGACCAAAAGTTGTACATAAAGACATCAAAAGTAGCAACATTCTCTTGGACTCAAACAAGAGAGCTAAAATTGCGAATTTTGGACTTGCAAAGAGCGGAATCAATGCAATTACAATGCACATTGTTGGAACACAAGGGTACATTTCGCCCGAATATCTAGCCGACGGTATTGTGTCAACAAAGATGGATGTGTTTTCTTTTGGTGTTGTGTTGCTTGAATTGATGTCCGGAAAGGAAGTTATTGATGATGAGGGGAATGTTTTGTGGGCTAATGCTATAAAAACATTTGAAGTGAAAAATGAACAAGAAAAGGCTAGGAGACTTAAGGAATGGTTGGATAAGGCTATTTTAAAGGAGACATGTTCAATGGAAAGTTTGATGGGTGTACTTAATGTTGCAATTGCTTGTTTGCATAGAGATCCTTCAAAGAGGCCTAGCATTATTGATATTGTTTACTCACTTAGTAAATGTGAAGAGAGTGGATTTGAGCTCTCAGATGATGGGTTTAGTTCACAAAATTTGGTGGCTAGGTGA | 1899 | 0.346 | MKTFKFHHHFFTLIFFLLLPFLKSQTQRQQNNTGYTCNNKNQTNIYPCQTYAYYRATLPNYLDLATISDLFSLSRLMISKPSNITSPSSPLVPNQPLLIPLTCSCNFINTTFGSISYSNITYTIKSGDTFFLVSTINYQNLTTYPSVEVVNPNLVATNLSVGDNVIFPIFCKCPDKTKTNSSFMISYVVQPFDSVSSIASMFGTTEKSIVDVNGEKLYDYDTIFVPVNKLPVLKQPSTIAPSPPPSGNFDDGGDDDDKSGTVRGLAIGLGILGFLLILVLGIWFYRGVFGKKEKKGRDMYLGEKGYKGNNNNDNKKKQMDVNFMANVSDCLDKYRVFGFDELVDATNGFDESHLIQGSVYKGVIDGQVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIEPEESNCYLVYEYVENGSLYSWLHEEKNQKLNWITRLRIAIDIANGLLYIHEHTRPKVVHKDIKSSNILLDSNKRAKIANFGLAKSGINAITMHIVGTQGYISPEYLADGIVSTKMDVFSFGVVLLELMSGKEVIDDEGNVLWANAIKTFEVKNEQEKARRLKEWLDKAILKETCSMESLMGVLNVAIACLHRDPSKRPSIIDIVYSLSKCEESGFELSDDGFSSQNLVAR | 632 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g01531 | 632 | SMART | serkin_6 | 349 | 611 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g01531 | 632 | Pfam | Protein kinase domain | 357 | 606 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g01531 | 632 | Gene3D | Transferase(Phosphotransferase) domain 1 | 415 | 623 | - | - | |
Trre2g01531 | 632 | Gene3D | LysM domain | 171 | 233 | IPR036779 | - | |
Trre2g01531 | 632 | Pfam | LysM domain | 187 | 225 | IPR018392 | - | |
Trre2g01531 | 632 | SMART | LysM_2 | 186 | 226 | IPR018392 | - | |
Trre2g01531 | 632 | SMART | LysM_2 | 121 | 168 | IPR018392 | - | |
Trre2g01531 | 632 | MobiDBLite | consensus disorder prediction | 235 | 255 | - | - | |
Trre2g01531 | 632 | Gene3D | Phosphorylase Kinase; domain 1 | 319 | 414 | - | - | |
Trre2g01531 | 632 | ProSiteProfiles | Protein kinase domain profile. | 331 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g01531 | 632 | PANTHER | LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED | 11 | 614 | - | - | |
Trre2g01531 | 632 | ProSiteProfiles | LysM domain profile. | 185 | 232 | IPR018392 | - | |
Trre2g01531 | 632 | SUPERFAMILY | Protein kinase-like (PK-like) | 333 | 609 | IPR011009 | - | |
Trre2g01531 | 632 | FunFam | PTI1-like tyrosine-protein kinase 3 | 415 | 622 | - | - | |
Trre2g01531 | 632 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 459 | 471 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g01531 | Trre-Chr2 | 12231655 | 12235349 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g01531 | 1 | 611 | Receptor kinase-like Gene Family | AT2G23770 | 33.179 | 1.02e-83 | 273 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Trre2g01531 | Pkinase | 2.9e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g01531 | - | - | lang:109352405 | 859.366 |