Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01521 ATGGCCTCTCTGTTATTCACAGTACAGAGGCATGCCCCTGAGTTTGTAAAGCCATCAAAACCAACACCTCATGAAATAAAACTACTTTCAGACATAGATGACCAAGATGGATTACGTTTTCAAATTCCTGTTATACAATTTTATAAATATGATCCAAAAATGAAAGGAAAAGACCCTGTTGATGTTATTAGAAAAGCACTTGCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTGAGGGAAGGTCCTGGTAGGAAACTTATGGTTGATTGTAATGATGAAGGTGTTTTGTTCATTGAAGCTGATGCTGATGTTAGACTTGAAGAATTTGGTGATGCTCTTCAACCTCCTTTTCCTTGTTTGAATGAACTTCTTTTTGATGTTCCTGGTTCTTCAGAAGTGCTTAATACTCCATTGCTGCTTATTCAGGTAACACGCCTCAAATGTGGTGGTTTTATATTCGCCCTCCGTCTAAACCATACAATGAGCGACGCAGCAGGTTTGACCCAATTTATGAGTGCCTTGGGTGAAATATCTTGTGGTTTGAAAGAGCCTTCAATTGCACCAGTGTGGCAAAGAGAGCTACTAAATGCAAGAGTCCCACCAAGAGTGACATGCAATCATCGCGAATACGAACAAATACCCGACACTAAGGGAACCATTATCCCCTTAGACGATATGGCCCACCGTTCTTTCTTTTTCGGTCCCACTGAGGTAGCATCTATTCGCGCTCTTCTTCCACCTCATCAACAAAACCAATCCAATTTTGAAATTCTCACGGCATGCCTTTGGCGTTGTCGTACAATAGCATTACAGCCAGACAATGACGAAGAAGTTCGCATTATCTGCATCGTTAACGCGCGTGGCAAGTTTAATCCACCTTTACCAAATGGTTACTACGGTAATACTTTCGCATTTCCAGTGGCAGTTACAACCGCGGGAAAATTAATTGAAAATCCATTGGGATACGCATTGGAGTTAGTTAAAAAAGCAAAAGCTGACGTCACTGAAGAATATATGCATTCAGTTGCGGATCTTATGGTTATCAAGAATCGACCACATTTTACCGTGGTGAGATCTTTTCTAGTGTCTGATGTGACACGTGCTGCATTTGGAGAGGTTGATTTTGGTTGGGGGAAAGCTTTTTATGGAGGACCAGCTAAAGGAGGAGTTGGTGCTATTCCTGGTGTTGCTAGCTTTTATATACCTTTCAAAAATGCTAAAGGAGAAACAGGTTTGGTTATACCTGTTTGTTTACCAAATCAAGCTATGGAGAGGTTTGTTAAAGAGTTAGATAATGTGCTTAAGAACAATATTAACCAACCTACTATAGATGGTCAAAAATCTAGTTTCATTATTTCTTCGTTGTAA 1377 0.3987 MASLLFTVQRHAPEFVKPSKPTPHEIKLLSDIDDQDGLRFQIPVIQFYKYDPKMKGKDPVDVIRKALAKTLVFYYPFAGRLREGPGRKLMVDCNDEGVLFIEADADVRLEEFGDALQPPFPCLNELLFDVPGSSEVLNTPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLTQFMSALGEISCGLKEPSIAPVWQRELLNARVPPRVTCNHREYEQIPDTKGTIIPLDDMAHRSFFFGPTEVASIRALLPPHQQNQSNFEILTACLWRCRTIALQPDNDEEVRIICIVNARGKFNPPLPNGYYGNTFAFPVAVTTAGKLIENPLGYALELVKKAKADVTEEYMHSVADLMVIKNRPHFTVVRSFLVSDVTRAAFGEVDFGWGKAFYGGPAKGGVGAIPGVASFYIPFKNAKGETGLVIPVCLPNQAMERFVKELDNVLKNNINQPTIDGQKSSFIISSL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01521 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 434 - -
Trre2g01521 458 Gene3D - 214 433 IPR023213 -
Trre2g01521 458 Pfam Transferase family 11 433 - -
Trre2g01521 458 Gene3D - 7 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01521 Trre-Chr2 12132832 12136262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01521 39 433 Monolignol Biosynthesis Gene Families AT5G48930 29.126 8.42e-47 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01521 K19861 - gmx:100797017 761.911