Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01520 ATGGAAGGTTCTGGTAGGAAACTTATGGTTGATTGTAATGATGAAGGTGTTTTGTTCAATGAAGCTGATGCTGATCTTAGACATGAAGCATTTGGTGATGCTCTTCAACCTCCTTTTCCTTGTTTGAATGAACTTTTTTTTTATGTTCCTCGTTCTTCAGAAGTGCTTAATACTCCATTGCCGCTTATTCAGGTAACACATCTTAAGTGCGGCGGTTTTATTTTTGCCATTCGTCTAAACCGCACAATGAGTGACGGCTTACATAACTACTCACCAGGTCCGTATTGGTTGTAA 294 0.3946 MEGSGRKLMVDCNDEGVLFNEADADLRHEAFGDALQPPFPCLNELFFYVPRSSEVLNTPLPLIQVTHLKCGGFIFAIRLNRTMSDGLHNYSPGPYWL 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01520 97 Pfam Transferase family 6 87 - -
Trre2g01520 97 Gene3D - 1 90 IPR023213 -
Trre2g01520 97 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01520 Trre-Chr2 12101445 12103165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01520 7 87 Monolignol Biosynthesis Gene Families AT5G48930 34.568 1.66e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01520 K19861 - sly:101262227 130.954