Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01499 ATGAAGCTTTTACCAATGCAGTGTCTGCTATTTTATGTGTTTGTAATGGTCACATCACCTCATGCTTCAGCTGAAATCCAAGGTAGTGAGGCTAATGCTCTATTGAAGTGGAAATCAAGCTTTGACAACAAAAGTCAGGCTTTGCTCTCTTCATGGATTGGTAATAATCCTTGTAGTTGGGAAGGAATCACATGTGATGATAACTCAACATCAATCTACGAGGTAAATCTCGCCAATATTGGACTAAGAGGTATGCTTCAAAGTCTAAATTTCTTATCACTTCCAAAACTGCGCAGTTTAGTATTAAGTCACAACTCCTTCTACGGAGTTATTCCACACACATTTGGAATGATGTCCAATCTAAAAACTCTCAATTTGTCATTTAACAAACTTTCTGGAAACATTTCCAATAGCATTGGTAATATGTCCAAACTTTCCTATCTTGACCTTGGTGGTAATGCTCTCACCGGTATTATACCGGTCACAATAGAAAAGATAACCAACTTGTCACATCTTGATATTGGAGGAAACAACCTATATGGCAACATTCCTCAGAGAGTTTGGAAAATGGACCTGAAGTATTTGTCACTTGCATATAATAACTTCAATGGTTTTATCTCACAAGATATTTTCAAGTTACAAAACCTAGAGATTTTATATCTTCAAGAAAGTGGCCTTTCTGGTTCCATACCAGAGGAACTTCAGATGATGAGGAATTTGAAAGAGCTTGATATTAGTAGTTGTAATCTCACTGGATCTATCCCTATTTCAATAGGAATGTTGTCCAATATATCAAGGCTTAGGTTAGAGAACAATCAACTTTTTGGCCACATTCCTCGTGAAATTGGAAAGTTGGTTAACCTAGAGCAACTACTTCTTGATAGAAATAATCTTACTAGCTATATTCCTCAAGAAATAGGATTCCTAAAAGAACTTCGTGAAATTGATTTGGCTGTTAACCATCTCTTTGGCACAATCCCTTCTACAATTGGAAACTTGAGCAATTTGCTATCCGTTTACCTTTATAAAAACTATCTAAATGGTAGCATTCCCACTGAATTCGGACAACTCCACTCTCTTGTAACAATTGATTTGTCATTTAACAACCTCTCTGGGCCAATCCCACCATCTATAGGATACTTGATTAATTTGGATACTATTGTTCTTTATCAAAATGAACTCTCGGGACTAATTCCTTCCACTATAGGAAATTTAACAAATCTCCGTATCTTAACTCTTTTCTCAAATGCACTTAGTGGCAATCTTCCTACAGAAATAAATAGCCTTAGAAATTTGAAAATATTACAGTTAGGTGATAATAATTTCATTGGTCATTTACCTCACAACATTTGTGCTAGTGGAATGTTGCAACAATTCTCTGCTAGGAATAACCAGTTTACAGGCCCAATTCCAAAGAGTTTGAAGAATTGTTCCAGCCTTACAAGAGTCAGGCTTGAACAAAACAACCTAACTGGAAATATAACAGATGATTTTGGTGTGTATCCACATTTGGACTACATGGATTTGAGTGATAATAATTTATATGGTCAGCTTTCTCCAAATTGGGGAAAGTGTAACAACCTCACAAGCCTTAAAATCTCAAATAATAATTTAACAGGGAGCATACCACCAGAAATGGCCGAGGCAACCAATTTACATATAATCGACTTTTCCTTAAACCAACTTACAGGAAAAATTCCTAAGGAGCTAGGCAACTTACCTTCATTGATCCAACTCTCGATAAGTAGCAATCAACTTTTAGGAGAAGTTCCTGTTCAGATTGCATTATTGCCCGAACTAACTATTTTGGAGCTTTCAACTAATAATTTAAGTGGCTTCATCCCAGAACAATTTGGAATGTTACCTAAGTTATTGTACTTGGATTTGAGCAACAACAAATTTGAAGGAAATATTCCTTTTGAGATTGGTCAATTAAAAGTGATTGAAAATCTTGATCTTAGTGGAAACTTTTTAGATGGAACCATACCAGCAATGCTCGGACAGTTGAAATACTTAGAAACATTGAATCTCTCACATAATAATCTCTCTGGTGTCTTTCCCTTTAGCTATGGTGATATTTTAAGCTTGACAATTGTTGATATATCATACAACCAATTGGAGGGTCCAATTCCAAGCATTCCAGCCTTCCAAAAAGCCTCATTTCAATCACTGAGAAATAATAAAGACTTGTGTGGTAATATATCTGGCCTAGAGCCTTGCTTGACATCACGTGGAAACATTCTTAGTCATAAGACTAACAAAATTTTGGTGACAATATTGCCCCTCACATTAGGCGCCTTATTGTTAGCATTATTTGTTTATGGGTTGTCTTATCATCTTTGTCAAACTTCAAGCACCAAAGAGTACAAGACTGCGGAAGAATCAAATGCTACAAATATTTTTTCTATATGGAGTTTTGATGGAAAAATAGTGTATGAGAACATTATCAAAGCCACTGAAGAGTTTGACAATAACTATCTCATTGGGGTTGGTGGACATGGCAATGTTTACAAAGCAGAATTGCCTACAGGTCAAGTTGTAGCTGTGAAGAAACTCCATTCATTACAAAATGAAGAAATGTCAAATTTAAAAGCTTTTGCAAGTGAGATCCGTGCTTTGACAGAAATTCGACATCGTAACATTGTGAAGTTATATGGATTTTGTTCACATTCACTACACTCTTTTTTGGTTTATGAATTCTTGGAGAAGGGTAGTCTAGACAAAATTTTAAAAGACGATCAACTGTCAACTGAATTTGATTGGAACACAAGAGTGAATGTCATTAAAGATATAGCTAATGCTTTATGTTATATGCATCATGATTTCTCACCTGCAATTGTTCATCGCGATATATCTAGCAAGAATGTTGTTTTGGATTTGGAATATGTAGCTCATGTCTCAGACTTCGGCACAGCTAAGTTTCTGAATCCCGACTCATCCAACTGGACTAATTTTGTAGGAACATTTGGATATACTGCTCCAGAACTTGCATACACAATGGAAGTAAATGAGAAGTGCGATGTGTATAGTTTTGGAGTATTAACCTTAGAAATACTTCTTGGAAAACACCCTGGAGATATTGTATCAACTTATTTGTATGGTGGTGTGTGCCTAACACCTGATGGTATGTCATTGATTGATAACTTGGATCAACGTCTTTCTCATCCTACAAATGTTATCATGAAAGAAGTGGTATTAATTATAAGGAGTGCAGTTGCTTGCTTAACTGAAAGTCCGCATTCTCGCCCTACCATGAAGGAGGTTTGCAAGGAGTTTGTAACTTTAAAGTAA 3291 0.3589 MKLLPMQCLLFYVFVMVTSPHASAEIQGSEANALLKWKSSFDNKSQALLSSWIGNNPCSWEGITCDDNSTSIYEVNLANIGLRGMLQSLNFLSLPKLRSLVLSHNSFYGVIPHTFGMMSNLKTLNLSFNKLSGNISNSIGNMSKLSYLDLGGNALTGIIPVTIEKITNLSHLDIGGNNLYGNIPQRVWKMDLKYLSLAYNNFNGFISQDIFKLQNLEILYLQESGLSGSIPEELQMMRNLKELDISSCNLTGSIPISIGMLSNISRLRLENNQLFGHIPREIGKLVNLEQLLLDRNNLTSYIPQEIGFLKELREIDLAVNHLFGTIPSTIGNLSNLLSVYLYKNYLNGSIPTEFGQLHSLVTIDLSFNNLSGPIPPSIGYLINLDTIVLYQNELSGLIPSTIGNLTNLRILTLFSNALSGNLPTEINSLRNLKILQLGDNNFIGHLPHNICASGMLQQFSARNNQFTGPIPKSLKNCSSLTRVRLEQNNLTGNITDDFGVYPHLDYMDLSDNNLYGQLSPNWGKCNNLTSLKISNNNLTGSIPPEMAEATNLHIIDFSLNQLTGKIPKELGNLPSLIQLSISSNQLLGEVPVQIALLPELTILELSTNNLSGFIPEQFGMLPKLLYLDLSNNKFEGNIPFEIGQLKVIENLDLSGNFLDGTIPAMLGQLKYLETLNLSHNNLSGVFPFSYGDILSLTIVDISYNQLEGPIPSIPAFQKASFQSLRNNKDLCGNISGLEPCLTSRGNILSHKTNKILVTILPLTLGALLLALFVYGLSYHLCQTSSTKEYKTAEESNATNIFSIWSFDGKIVYENIIKATEEFDNNYLIGVGGHGNVYKAELPTGQVVAVKKLHSLQNEEMSNLKAFASEIRALTEIRHRNIVKLYGFCSHSLHSFLVYEFLEKGSLDKILKDDQLSTEFDWNTRVNVIKDIANALCYMHHDFSPAIVHRDISSKNVVLDLEYVAHVSDFGTAKFLNPDSSNWTNFVGTFGYTAPELAYTMEVNEKCDVYSFGVLTLEILLGKHPGDIVSTYLYGGVCLTPDGMSLIDNLDQRLSHPTNVIMKEVVLIIRSAVACLTESPHSRPTMKEVCKEFVTLK 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01499 1096 ProSiteProfiles Leucine-rich repeat profile. 120 142 IPR001611 GO:0005515
Trre2g01499 1096 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Trre2g01499 1096 PANTHER LEUCINE RICH REPEAT KINASE 2 374 1095 - -
Trre2g01499 1096 ProSitePatterns Tyrosine protein kinases specific active-site signature. 946 958 IPR008266 GO:0004672|GO:0006468
Trre2g01499 1096 SMART LRR_typ_2 261 284 IPR003591 -
Trre2g01499 1096 SMART LRR_typ_2 429 453 IPR003591 -
Trre2g01499 1096 SMART LRR_typ_2 357 381 IPR003591 -
Trre2g01499 1096 SMART LRR_typ_2 118 141 IPR003591 -
Trre2g01499 1096 SMART LRR_typ_2 621 645 IPR003591 -
Trre2g01499 1096 SMART LRR_typ_2 94 117 IPR003591 -
Trre2g01499 1096 SMART LRR_typ_2 142 165 IPR003591 -
Trre2g01499 1096 SMART LRR_typ_2 285 309 IPR003591 -
Trre2g01499 1096 SMART LRR_typ_2 597 620 IPR003591 -
Trre2g01499 1096 SMART LRR_typ_2 669 692 IPR003591 -
Trre2g01499 1096 SMART LRR_typ_2 405 428 IPR003591 -
Trre2g01499 1096 SMART LRR_typ_2 166 190 IPR003591 -
Trre2g01499 1096 SUPERFAMILY Protein kinase-like (PK-like) 801 1090 IPR011009 -
Trre2g01499 1096 Pfam Leucine rich repeat 649 706 IPR001611 GO:0005515
Trre2g01499 1096 Pfam Leucine rich repeat 192 250 IPR001611 GO:0005515
Trre2g01499 1096 Pfam Leucine rich repeat 95 155 IPR001611 GO:0005515
Trre2g01499 1096 Pfam Leucine rich repeat 311 370 IPR001611 GO:0005515
Trre2g01499 1096 Pfam Leucine rich repeat 527 586 IPR001611 GO:0005515
Trre2g01499 1096 SUPERFAMILY RNI-like 315 712 - -
Trre2g01499 1096 SMART LRR_sd22_2 621 653 - -
Trre2g01499 1096 SMART LRR_sd22_2 309 335 - -
Trre2g01499 1096 SMART LRR_sd22_2 118 137 - -
Trre2g01499 1096 SMART LRR_sd22_2 142 171 - -
Trre2g01499 1096 SMART LRR_sd22_2 357 386 - -
Trre2g01499 1096 ProSiteProfiles Protein kinase domain profile. 822 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01499 1096 FunFam Leucine-rich receptor-like protein kinase family protein 328 424 - -
Trre2g01499 1096 SUPERFAMILY RNI-like 68 347 - -
Trre2g01499 1096 FunFam Leucine-rich receptor-like protein kinase family protein 230 327 - -
Trre2g01499 1096 ProSitePatterns Protein kinases ATP-binding region signature. 828 851 IPR017441 GO:0005524
Trre2g01499 1096 Gene3D Phosphorylase Kinase; domain 1 781 900 - -
Trre2g01499 1096 FunFam MDIS1-interacting receptor like kinase 2 901 1096 - -
Trre2g01499 1096 Pfam Protein kinase domain 826 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01499 1096 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 429 744 - -
Trre2g01499 1096 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Trre2g01499 1096 FunFam Leucine-rich repeat receptor protein kinase MSP1 784 900 - -
Trre2g01499 1096 Gene3D Ribonuclease Inhibitor 190 324 IPR032675 -
Trre2g01499 1096 Gene3D Ribonuclease Inhibitor 439 742 IPR032675 -
Trre2g01499 1096 Gene3D Transferase(Phosphotransferase) domain 1 901 1096 - -
Trre2g01499 1096 FunFam Nuclear pore complex protein NUP107 27 185 - -
Trre2g01499 1096 Gene3D Ribonuclease Inhibitor 325 427 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01499 Trre-Chr2 11961388 11964841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01499 6 994 Receptor kinase-like Gene Family AT4G08850 41.283 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre2g01499 Pkinase 2.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01499 - - gmx:100811066 1228