Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g01499 | ATGAAGCTTTTACCAATGCAGTGTCTGCTATTTTATGTGTTTGTAATGGTCACATCACCTCATGCTTCAGCTGAAATCCAAGGTAGTGAGGCTAATGCTCTATTGAAGTGGAAATCAAGCTTTGACAACAAAAGTCAGGCTTTGCTCTCTTCATGGATTGGTAATAATCCTTGTAGTTGGGAAGGAATCACATGTGATGATAACTCAACATCAATCTACGAGGTAAATCTCGCCAATATTGGACTAAGAGGTATGCTTCAAAGTCTAAATTTCTTATCACTTCCAAAACTGCGCAGTTTAGTATTAAGTCACAACTCCTTCTACGGAGTTATTCCACACACATTTGGAATGATGTCCAATCTAAAAACTCTCAATTTGTCATTTAACAAACTTTCTGGAAACATTTCCAATAGCATTGGTAATATGTCCAAACTTTCCTATCTTGACCTTGGTGGTAATGCTCTCACCGGTATTATACCGGTCACAATAGAAAAGATAACCAACTTGTCACATCTTGATATTGGAGGAAACAACCTATATGGCAACATTCCTCAGAGAGTTTGGAAAATGGACCTGAAGTATTTGTCACTTGCATATAATAACTTCAATGGTTTTATCTCACAAGATATTTTCAAGTTACAAAACCTAGAGATTTTATATCTTCAAGAAAGTGGCCTTTCTGGTTCCATACCAGAGGAACTTCAGATGATGAGGAATTTGAAAGAGCTTGATATTAGTAGTTGTAATCTCACTGGATCTATCCCTATTTCAATAGGAATGTTGTCCAATATATCAAGGCTTAGGTTAGAGAACAATCAACTTTTTGGCCACATTCCTCGTGAAATTGGAAAGTTGGTTAACCTAGAGCAACTACTTCTTGATAGAAATAATCTTACTAGCTATATTCCTCAAGAAATAGGATTCCTAAAAGAACTTCGTGAAATTGATTTGGCTGTTAACCATCTCTTTGGCACAATCCCTTCTACAATTGGAAACTTGAGCAATTTGCTATCCGTTTACCTTTATAAAAACTATCTAAATGGTAGCATTCCCACTGAATTCGGACAACTCCACTCTCTTGTAACAATTGATTTGTCATTTAACAACCTCTCTGGGCCAATCCCACCATCTATAGGATACTTGATTAATTTGGATACTATTGTTCTTTATCAAAATGAACTCTCGGGACTAATTCCTTCCACTATAGGAAATTTAACAAATCTCCGTATCTTAACTCTTTTCTCAAATGCACTTAGTGGCAATCTTCCTACAGAAATAAATAGCCTTAGAAATTTGAAAATATTACAGTTAGGTGATAATAATTTCATTGGTCATTTACCTCACAACATTTGTGCTAGTGGAATGTTGCAACAATTCTCTGCTAGGAATAACCAGTTTACAGGCCCAATTCCAAAGAGTTTGAAGAATTGTTCCAGCCTTACAAGAGTCAGGCTTGAACAAAACAACCTAACTGGAAATATAACAGATGATTTTGGTGTGTATCCACATTTGGACTACATGGATTTGAGTGATAATAATTTATATGGTCAGCTTTCTCCAAATTGGGGAAAGTGTAACAACCTCACAAGCCTTAAAATCTCAAATAATAATTTAACAGGGAGCATACCACCAGAAATGGCCGAGGCAACCAATTTACATATAATCGACTTTTCCTTAAACCAACTTACAGGAAAAATTCCTAAGGAGCTAGGCAACTTACCTTCATTGATCCAACTCTCGATAAGTAGCAATCAACTTTTAGGAGAAGTTCCTGTTCAGATTGCATTATTGCCCGAACTAACTATTTTGGAGCTTTCAACTAATAATTTAAGTGGCTTCATCCCAGAACAATTTGGAATGTTACCTAAGTTATTGTACTTGGATTTGAGCAACAACAAATTTGAAGGAAATATTCCTTTTGAGATTGGTCAATTAAAAGTGATTGAAAATCTTGATCTTAGTGGAAACTTTTTAGATGGAACCATACCAGCAATGCTCGGACAGTTGAAATACTTAGAAACATTGAATCTCTCACATAATAATCTCTCTGGTGTCTTTCCCTTTAGCTATGGTGATATTTTAAGCTTGACAATTGTTGATATATCATACAACCAATTGGAGGGTCCAATTCCAAGCATTCCAGCCTTCCAAAAAGCCTCATTTCAATCACTGAGAAATAATAAAGACTTGTGTGGTAATATATCTGGCCTAGAGCCTTGCTTGACATCACGTGGAAACATTCTTAGTCATAAGACTAACAAAATTTTGGTGACAATATTGCCCCTCACATTAGGCGCCTTATTGTTAGCATTATTTGTTTATGGGTTGTCTTATCATCTTTGTCAAACTTCAAGCACCAAAGAGTACAAGACTGCGGAAGAATCAAATGCTACAAATATTTTTTCTATATGGAGTTTTGATGGAAAAATAGTGTATGAGAACATTATCAAAGCCACTGAAGAGTTTGACAATAACTATCTCATTGGGGTTGGTGGACATGGCAATGTTTACAAAGCAGAATTGCCTACAGGTCAAGTTGTAGCTGTGAAGAAACTCCATTCATTACAAAATGAAGAAATGTCAAATTTAAAAGCTTTTGCAAGTGAGATCCGTGCTTTGACAGAAATTCGACATCGTAACATTGTGAAGTTATATGGATTTTGTTCACATTCACTACACTCTTTTTTGGTTTATGAATTCTTGGAGAAGGGTAGTCTAGACAAAATTTTAAAAGACGATCAACTGTCAACTGAATTTGATTGGAACACAAGAGTGAATGTCATTAAAGATATAGCTAATGCTTTATGTTATATGCATCATGATTTCTCACCTGCAATTGTTCATCGCGATATATCTAGCAAGAATGTTGTTTTGGATTTGGAATATGTAGCTCATGTCTCAGACTTCGGCACAGCTAAGTTTCTGAATCCCGACTCATCCAACTGGACTAATTTTGTAGGAACATTTGGATATACTGCTCCAGAACTTGCATACACAATGGAAGTAAATGAGAAGTGCGATGTGTATAGTTTTGGAGTATTAACCTTAGAAATACTTCTTGGAAAACACCCTGGAGATATTGTATCAACTTATTTGTATGGTGGTGTGTGCCTAACACCTGATGGTATGTCATTGATTGATAACTTGGATCAACGTCTTTCTCATCCTACAAATGTTATCATGAAAGAAGTGGTATTAATTATAAGGAGTGCAGTTGCTTGCTTAACTGAAAGTCCGCATTCTCGCCCTACCATGAAGGAGGTTTGCAAGGAGTTTGTAACTTTAAAGTAA | 3291 | 0.3589 | MKLLPMQCLLFYVFVMVTSPHASAEIQGSEANALLKWKSSFDNKSQALLSSWIGNNPCSWEGITCDDNSTSIYEVNLANIGLRGMLQSLNFLSLPKLRSLVLSHNSFYGVIPHTFGMMSNLKTLNLSFNKLSGNISNSIGNMSKLSYLDLGGNALTGIIPVTIEKITNLSHLDIGGNNLYGNIPQRVWKMDLKYLSLAYNNFNGFISQDIFKLQNLEILYLQESGLSGSIPEELQMMRNLKELDISSCNLTGSIPISIGMLSNISRLRLENNQLFGHIPREIGKLVNLEQLLLDRNNLTSYIPQEIGFLKELREIDLAVNHLFGTIPSTIGNLSNLLSVYLYKNYLNGSIPTEFGQLHSLVTIDLSFNNLSGPIPPSIGYLINLDTIVLYQNELSGLIPSTIGNLTNLRILTLFSNALSGNLPTEINSLRNLKILQLGDNNFIGHLPHNICASGMLQQFSARNNQFTGPIPKSLKNCSSLTRVRLEQNNLTGNITDDFGVYPHLDYMDLSDNNLYGQLSPNWGKCNNLTSLKISNNNLTGSIPPEMAEATNLHIIDFSLNQLTGKIPKELGNLPSLIQLSISSNQLLGEVPVQIALLPELTILELSTNNLSGFIPEQFGMLPKLLYLDLSNNKFEGNIPFEIGQLKVIENLDLSGNFLDGTIPAMLGQLKYLETLNLSHNNLSGVFPFSYGDILSLTIVDISYNQLEGPIPSIPAFQKASFQSLRNNKDLCGNISGLEPCLTSRGNILSHKTNKILVTILPLTLGALLLALFVYGLSYHLCQTSSTKEYKTAEESNATNIFSIWSFDGKIVYENIIKATEEFDNNYLIGVGGHGNVYKAELPTGQVVAVKKLHSLQNEEMSNLKAFASEIRALTEIRHRNIVKLYGFCSHSLHSFLVYEFLEKGSLDKILKDDQLSTEFDWNTRVNVIKDIANALCYMHHDFSPAIVHRDISSKNVVLDLEYVAHVSDFGTAKFLNPDSSNWTNFVGTFGYTAPELAYTMEVNEKCDVYSFGVLTLEILLGKHPGDIVSTYLYGGVCLTPDGMSLIDNLDQRLSHPTNVIMKEVVLIIRSAVACLTESPHSRPTMKEVCKEFVTLK | 1096 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g01499 | 1096 | ProSiteProfiles | Leucine-rich repeat profile. | 120 | 142 | IPR001611 | GO:0005515 | |
Trre2g01499 | 1096 | Gene3D | Ribonuclease Inhibitor | 27 | 189 | IPR032675 | - | |
Trre2g01499 | 1096 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 374 | 1095 | - | - | |
Trre2g01499 | 1096 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 946 | 958 | IPR008266 | GO:0004672|GO:0006468 | |
Trre2g01499 | 1096 | SMART | LRR_typ_2 | 261 | 284 | IPR003591 | - | |
Trre2g01499 | 1096 | SMART | LRR_typ_2 | 429 | 453 | IPR003591 | - | |
Trre2g01499 | 1096 | SMART | LRR_typ_2 | 357 | 381 | IPR003591 | - | |
Trre2g01499 | 1096 | SMART | LRR_typ_2 | 118 | 141 | IPR003591 | - | |
Trre2g01499 | 1096 | SMART | LRR_typ_2 | 621 | 645 | IPR003591 | - | |
Trre2g01499 | 1096 | SMART | LRR_typ_2 | 94 | 117 | IPR003591 | - | |
Trre2g01499 | 1096 | SMART | LRR_typ_2 | 142 | 165 | IPR003591 | - | |
Trre2g01499 | 1096 | SMART | LRR_typ_2 | 285 | 309 | IPR003591 | - | |
Trre2g01499 | 1096 | SMART | LRR_typ_2 | 597 | 620 | IPR003591 | - | |
Trre2g01499 | 1096 | SMART | LRR_typ_2 | 669 | 692 | IPR003591 | - | |
Trre2g01499 | 1096 | SMART | LRR_typ_2 | 405 | 428 | IPR003591 | - | |
Trre2g01499 | 1096 | SMART | LRR_typ_2 | 166 | 190 | IPR003591 | - | |
Trre2g01499 | 1096 | SUPERFAMILY | Protein kinase-like (PK-like) | 801 | 1090 | IPR011009 | - | |
Trre2g01499 | 1096 | Pfam | Leucine rich repeat | 649 | 706 | IPR001611 | GO:0005515 | |
Trre2g01499 | 1096 | Pfam | Leucine rich repeat | 192 | 250 | IPR001611 | GO:0005515 | |
Trre2g01499 | 1096 | Pfam | Leucine rich repeat | 95 | 155 | IPR001611 | GO:0005515 | |
Trre2g01499 | 1096 | Pfam | Leucine rich repeat | 311 | 370 | IPR001611 | GO:0005515 | |
Trre2g01499 | 1096 | Pfam | Leucine rich repeat | 527 | 586 | IPR001611 | GO:0005515 | |
Trre2g01499 | 1096 | SUPERFAMILY | RNI-like | 315 | 712 | - | - | |
Trre2g01499 | 1096 | SMART | LRR_sd22_2 | 621 | 653 | - | - | |
Trre2g01499 | 1096 | SMART | LRR_sd22_2 | 309 | 335 | - | - | |
Trre2g01499 | 1096 | SMART | LRR_sd22_2 | 118 | 137 | - | - | |
Trre2g01499 | 1096 | SMART | LRR_sd22_2 | 142 | 171 | - | - | |
Trre2g01499 | 1096 | SMART | LRR_sd22_2 | 357 | 386 | - | - | |
Trre2g01499 | 1096 | ProSiteProfiles | Protein kinase domain profile. | 822 | 1093 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g01499 | 1096 | FunFam | Leucine-rich receptor-like protein kinase family protein | 328 | 424 | - | - | |
Trre2g01499 | 1096 | SUPERFAMILY | RNI-like | 68 | 347 | - | - | |
Trre2g01499 | 1096 | FunFam | Leucine-rich receptor-like protein kinase family protein | 230 | 327 | - | - | |
Trre2g01499 | 1096 | ProSitePatterns | Protein kinases ATP-binding region signature. | 828 | 851 | IPR017441 | GO:0005524 | |
Trre2g01499 | 1096 | Gene3D | Phosphorylase Kinase; domain 1 | 781 | 900 | - | - | |
Trre2g01499 | 1096 | FunFam | MDIS1-interacting receptor like kinase 2 | 901 | 1096 | - | - | |
Trre2g01499 | 1096 | Pfam | Protein kinase domain | 826 | 1090 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g01499 | 1096 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 429 | 744 | - | - | |
Trre2g01499 | 1096 | Pfam | Leucine rich repeat N-terminal domain | 29 | 66 | IPR013210 | - | |
Trre2g01499 | 1096 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 784 | 900 | - | - | |
Trre2g01499 | 1096 | Gene3D | Ribonuclease Inhibitor | 190 | 324 | IPR032675 | - | |
Trre2g01499 | 1096 | Gene3D | Ribonuclease Inhibitor | 439 | 742 | IPR032675 | - | |
Trre2g01499 | 1096 | Gene3D | Transferase(Phosphotransferase) domain 1 | 901 | 1096 | - | - | |
Trre2g01499 | 1096 | FunFam | Nuclear pore complex protein NUP107 | 27 | 185 | - | - | |
Trre2g01499 | 1096 | Gene3D | Ribonuclease Inhibitor | 325 | 427 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g01499 | Trre-Chr2 | 11961388 | 11964841 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g01499 | 6 | 994 | Receptor kinase-like Gene Family | AT4G08850 | 41.283 | 0.0 | 711 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Trre2g01499 | Pkinase | 2.2e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g01499 | - | - | gmx:100811066 | 1228 |