Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01492 ATGTTTTTGAACGATAATAATAACAATACTAACGGCTACAACCACCATCAACCACCACCATCACCGCCGCCAGGAATGTTACAAACTCATAGCCGCCGTGACCGTGCACGCCATGGTACTCGCCGTTCACGTGCTTCCACTTCCACTTCTAATTCCATTGTTAGGGTTTCCGATACCGAACAACAACCACCACCACAACAACAAGAACAACAACAACCTAATCGATCTCCTTGCACCGATTACGATATGGCGTATTTTCATTCCTATGCTCACCTCGGTATTCACCAAGAAATGATCAAGGATCGTGTGCGGACTGAAACTTATAGGGAAGCAATCATGCGGCATCAGAATTTTATTGCTGGCAAAGTCGTAGTTGATGTTGGATGCGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCCGGTGCAAAGCGGGTGTATGCAGTTGATGCCAGTGACATTGCCCTGCAGGCAAATGAAGTTGTTAAAGCAAATAATCTTTCTGATGTTGTCATTGTATTGCATGGCCGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGACGTTATAATTTCAGAATGGATGGGCTATATGCTACTATATGAGAGCATGCTTGGGAGTGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGTGGTCTAATTTTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTCACACATACTGACAGATACAGTGACAGCGTCGACTTTTGGCGCAATGTGTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAGTGTGCATTTGAGGAACCTTCTGTTGAGACGATAACTGGTGAAAATGTTCTGACATGGCCACATGTGGTAAAATATATTGATAGCTATAGTGTTACCATCAGCGAGTTAGAAACTGTAACATCGAAGTTTAAGTTCAACTCAATGATGCGAGCTCCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAGTTTAATGTGCCTACGATATCACCAACATCAGTTACCGAAAGTCATCAGGTGAATGGTAGTTTGAGAAAAAAACGAACAAATCCAAGTGAAGCACTGGTACTATCCACTGCACCCGAGGACCCTCCAACACATTGGCAGCAGACATTGGTATACTTTTATGATCCTATTGAGCTGGAACAAGATCAAGTTATTGAAGGTTTAGTGACATTGACACAAAGCAAAGAAAATGCCCGGTTTATGAATATTCACCTGGAATACACTTCAGGTAATCGATCGTATGTGAAAGAGTCTGTTATGAGATGA 1284 0.4252 MFLNDNNNNTNGYNHHQPPPSPPPGMLQTHSRRDRARHGTRRSRASTSTSNSIVRVSDTEQQPPPQQQEQQQPNRSPCTDYDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQNFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLIFPSSATLYMAPVTHTDRYSDSVDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENVLTWPHVVKYIDSYSVTISELETVTSKFKFNSMMRAPLHGFAFWFDVEFNVPTISPTSVTESHQVNGSLRKKRTNPSEALVLSTAPEDPPTHWQQTLVYFYDPIELEQDQVIEGLVTLTQSKENARFMNIHLEYTSGNRSYVKESVMR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01492 427 MobiDBLite consensus disorder prediction 1 15 - -
Trre2g01492 427 MobiDBLite consensus disorder prediction 43 78 - -
Trre2g01492 427 Pfam Ribosomal protein L11 methyltransferase (PrmA) 120 194 - -
Trre2g01492 427 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 82 410 IPR025799 GO:0016274|GO:0018216
Trre2g01492 427 Gene3D Vaccinia Virus protein VP39 79 224 IPR029063 -
Trre2g01492 427 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 37 417 IPR025799 GO:0016274|GO:0018216
Trre2g01492 427 Gene3D - 226 426 - -
Trre2g01492 427 FunFam Protein arginine N-methyltransferase 6 78 224 - -
Trre2g01492 427 MobiDBLite consensus disorder prediction 1 80 - -
Trre2g01492 427 FunFam Protein arginine N-methyltransferase 6 226 425 - -
Trre2g01492 427 CDD AdoMet_MTases 124 223 - -
Trre2g01492 427 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 88 417 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01492 Trre-Chr2 11914830 11924090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01492 85 393 C2H2 Transcription Factor Family AT3G12270 39.815 6.10e-66 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01492 K11437 - gmx:100809171 649.818