Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01463 ATGTCTAACTGCAAGGAAACAACAACTACTACAACTACAACTAACGCCGTCGAAACCACAAACCAAACCGTTAAAAAACCGCCGTCAAAAGACCGTCACAGCAAAGTAGACGGACGTGGAAGAAGAATACGCATGCCAATAATATGCGCCGCACGTGTTTTCCAGTTAACACGTGAGTTAGGCCATAAATCCGACGGTCAAACTATTGAATGGCTTCTCCGACAAGCTGAACCGTCGATTATCGCCGCTACCGGTACCGGAACTACTCCGGCTTCATTCTCTTCTCTTTCTGAACATAAACCTCTTCTTCCTCCTTCTCCTTTCATTCTTGGTAAACGTTTAAGGTCTGAACATGATGAAGCTGTTTCGATTGCTGCTCCGACTGCTCCGCCGGGTATATGGCGGCCGGATTTTGCTCAACTTTGGAGTTTTGCTGCTGCTCAACCTCCACCGGAAGTTCTTTCAATGTCACCGCATCAGCATCAGCAACAACATCAGCATAATTCGTTGTTTCATCATCAACAACAGCAGCAGAATCAGCACCAGCATCAGCATCAGCATCAACAGCAAGGTTCTATGGGAGAAGCTTCGGCGGCAAGGTTAGGGAATTATCTTCCTGGACATTTGAATTTGCTTGCTTCGTTGTCTGGTGGTAATGGTAATTCCGGCCGAGGAGATGATGAGGATCGTTGA 693 0.469 MSNCKETTTTTTTTNAVETTNQTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSEHKPLLPPSPFILGKRLRSEHDEAVSIAAPTAPPGIWRPDFAQLWSFAAAQPPPEVLSMSPHQHQQQHQHNSLFHHQQQQQNQHQHQHQHQQQGSMGEASAARLGNYLPGHLNLLASLSGGNGNSGRGDDEDR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01463 230 MobiDBLite consensus disorder prediction 150 196 - -
Trre2g01463 230 MobiDBLite consensus disorder prediction 25 41 - -
Trre2g01463 230 ProSiteProfiles TCP domain profile. 29 83 IPR017887 -
Trre2g01463 230 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 190 IPR005333 GO:0003700
Trre2g01463 230 Pfam TCP family transcription factor 29 188 IPR017887 -
Trre2g01463 230 MobiDBLite consensus disorder prediction 155 196 - -
Trre2g01463 230 MobiDBLite consensus disorder prediction 1 41 - -
Trre2g01463 230 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01463 Trre-Chr2 11722555 11723247 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01463 23 230 TCP Transcription Factor Family AT5G23280 60.169 1.90e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trre2g01463 TCP 5.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01463 K16221 - gmx:100786264 243.432