Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01456 ATGGATCATTTAACCATTTTAACATATCGACAAGCAATTTCAGCCATTTTCTTGGCACCTATTGCTTGCTTCTTTGAAAGGGAAAGCAAGATTAATGGCCATATAATATGCCTCCTTTTCTTTAGTGCTCTTGTAGGTGCAACACTCACTCAATATCTCTATCTTGTTGGACTTGAGTATACATCGGCAACATTCTCATGTGCATTCCTCAATACGGTACCTGTATTCACGTTCATTATGGCACTCCCAATGGGGATGGAGAAAGTGAACATAAAAAACAAGAGTGGTAAAGCCAAAATCTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGGTATTAATCCTTTATAAAGGAATGCCCATAATCAACCCACAATCTCATCACATAGAAGGCAAAGCCACAACAATATCAGCAGCAGCATCCAACTTAAAGAAATGGATTATAGGTTCAATATTTCTGACTGCAGGTTGCCTCTTGTGGTCTTCATGGTTTCTTATACAAGAAAAGGTTGGCAAAAAGTATCCATATCAATACTCTAGCACAGCCATTTTGTCACTCTTTGCTACCATTCAATCAGCAATATTAAATTTGATTGTCCATAGAAACAATGCCAAATGGATTCTCAAAGGAAAGCTACAAATATTGACTGTTGTATATTCTGGGCTGGTGGGAACAGGATTGTGTTATGTGGCAATGGCATGGTGTGTCAAACAAAGGGGTCCAGTTTTTACTGCAGCATTTACCCCACTTTTACAGATGTTTGTGGCAGTTCTTGATCTCTGGATATTAAAAGAGGAAATTTATCTAGGAAGTGTTGTAGGATCAGTCTTGGTTATTTCTGGCATGTATATGCTCCTATGGGGTAAAAGTAAAGATAGAGGACAATGTGCCTTGAAGGACACTCAAGAAAATCAAAAAGATGAAGAATGTCACTAA 936 0.3814 MDHLTILTYRQAISAIFLAPIACFFERESKINGHIICLLFFSALVGATLTQYLYLVGLEYTSATFSCAFLNTVPVFTFIMALPMGMEKVNIKNKSGKAKILGTFVCIGGALVLILYKGMPIINPQSHHIEGKATTISAAASNLKKWIIGSIFLTAGCLLWSSWFLIQEKVGKKYPYQYSSTAILSLFATIQSAILNLIVHRNNAKWILKGKLQILTVVYSGLVGTGLCYVAMAWCVKQRGPVFTAAFTPLLQMFVAVLDLWILKEEIYLGSVVGSVLVISGMYMLLWGKSKDRGQCALKDTQENQKDEECH 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01456 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 9 117 - -
Trre2g01456 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 211 291 - -
Trre2g01456 311 PANTHER WAT1-RELATED PROTEIN 1 301 IPR030184 GO:0016020|GO:0022857
Trre2g01456 311 Pfam EamA-like transporter family 1 114 IPR000620 GO:0016020
Trre2g01456 311 Pfam EamA-like transporter family 148 286 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01456 Trre-Chr2 11678987 11681706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01456 1 292 Nodulin-like Gene Family AT1G11460 40.339 8.63e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01456 - - gmx:100794199 484.182