Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01455 ATGGTGTTGGTTAATTTCCATGAAATGTGGAAACCAATTTTGGTTATGATTATAGTTAATTTAGCTTTAGCTTTTGTCAATGTATTTCTGAAGAAGGTTCTTAGTGAAGGAATGGATCATTTAACCATTTTAACATATCGACAAGCAATTTCAGCCATTTTCTTGGCACCTATTGCTTGCTTCTTTGAAAGGGAAAGCAAGATTAATGGCCATATAATATGCCTCCTTTTCTTTAGTGCTCTTGTAGGTGCAACACTCACTCAATATCTCTATCTTGTTGGACTTGAGTATACATCGGCAACATTCTCATGTGCATTCCTCAATACGGTACCTGTATTCACGTTCATTATGGCACTCCCAATGGGGATGGAGAAAGTGAACATAAAAAACAAGAGTGGTAAAGCCAAAATCTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGGTATTAATCCTTTATAAAGGAATGCCCATAATCAACCCACAATCTCATCACATAGAAGGCAAAGCCACAACAATATCAGCAGCAGCATCCAACTTAAAGAAATGGATTATAGGTTCAATATTTCTGACTGCAGGTTGCCTCTTGTGGTCTTCATGGTTTCTTATACAAGAAAAGGTTGGCAAAAAGTATCCATATCAATACTCTAGCACAGCCATTTTGTCACTCTTTGCTACCATTCAATCAGCAATATTAAATTTGATTGTCCATAGAAACAATGCCAAATGGATTCTCAAAGGAAAGCTACAAATATTGACTGTTGTATATTCTGGGCTGGTGGGAACAGGATTGTGTTATGTGGCAATGGCATGGTGTGTCAAACAAAGGGGTCCAGTTTTTACTGCAGCATTTACCCCACTTTTACAGATGTTTGTGGCAGTTCTTGATCTCTGGATATTAAAAGAGGAAATTTATCTAGGAAGTGTTGTAGGATCAGTCTTGGTTATTTCTGGCATGTATATGCTCCTATGGGGTAAAAGTAAAGATAGAGGACAATGTGCCTTGAAGGACACTCAAGAAAATCAAAAAGATGAAGAATGTCACTAA 1047 0.3734 MVLVNFHEMWKPILVMIIVNLALAFVNVFLKKVLSEGMDHLTILTYRQAISAIFLAPIACFFERESKINGHIICLLFFSALVGATLTQYLYLVGLEYTSATFSCAFLNTVPVFTFIMALPMGMEKVNIKNKSGKAKILGTFVCIGGALVLILYKGMPIINPQSHHIEGKATTISAAASNLKKWIIGSIFLTAGCLLWSSWFLIQEKVGKKYPYQYSSTAILSLFATIQSAILNLIVHRNNAKWILKGKLQILTVVYSGLVGTGLCYVAMAWCVKQRGPVFTAAFTPLLQMFVAVLDLWILKEEIYLGSVVGSVLVISGMYMLLWGKSKDRGQCALKDTQENQKDEECH 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01455 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Trre2g01455 348 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020
Trre2g01455 348 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Trre2g01455 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 328 - -
Trre2g01455 348 PANTHER WAT1-RELATED PROTEIN 11 338 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01455 Trre-Chr2 11678876 11681706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01455 8 257 Nodulin-like Gene Family AT3G30340 48.413 4.20e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01455 - - gmx:100794199 546.584