Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01450 ATGAAGGAAAAACTATCCTTTTCTCTCCCTTCATCAAAATCTTCATCCAAATCCAACAATTCCGTTAAACCCTCTCAAACTTTCCACCATGATTCTTCCACAGATCAACAACAACAAAAACAATTAATCACCGAATTCGATCCATCAAAACCTCAAACCCTAAACCCAAATCCCAAAACCCTAATTGCCCCAATCGAAAATCAATGGCGTCCACACAAAAAAATGAAGAATCTCGATCTCCCCATCACCGATTCACACTCTTCCCATTCCCTAACCTTCGAACAAGACACATCTTCAATCTCCGATCAACCTGCTGACAAATCATCCTATGGTCTCAACCTTCGTTCCACCGACAACAACAACAACAAAAAACAGCAATCCGATGTTGTTGATGAGCAGCCACGGCCACGTGCTTCTGTGGAGGTTTCTATGCTTCAGAAATTCAAGGAAGACATGGAAAAACTTCCGTCTGATCAAGGTTTTGACGAGTATATAGATGTTCCTGTTGATGGATTCGGTGCGGCGCTTCTTGGTGGTTATGGATGGAAAGAAGGAATGGGGATTGGGAAAAATGCTAAGGAGGATATTAAGGTTGTTCAGGTTAAGAGGAGGACTGCTAAGGAAGGTTTGGGTTTTGTTGCTGATATGCCTCCTCCCACGTCGAAGAAAGGTGAAAGGAATGGGAAGTTGGAGAGTGAGAAGAGGAAGAAGGAGGAGAGATTTGTTAGGATTGTTAGAGGTAGAGATGTTGGATTGAAGGCTAGTGTTGTAGGTAGAATTGGGGATGATGTTCTTGTTTTGAAGGTTTTAGGAAGTGGTGATATAGTTGAGGTTAAGGTAGATGATGTTGCTGAATTGGGTTCTGTTGAGGAAGATAGATGTTTGAGAAAGTTGAAGGATGTGAAGATTCGTGGGAGGGATGAGGAAAAAGGGTCCAAGAGTAAGCGTGACGAGGAAAAAGCGCCTCGAAGTAAGCGTGGGAGGGATGAGGTTGAAGAGAGGAGAGTGAATTCTAATGGTGGGGATAAGGAAGAGAAGGGGAAGAAACAAGTTTCTTGGCTTACAAGTCATATTCGGGTTAGAGTGGTTAGTAGAAGTTTTAAAGGGGGGAGATTTTATTTGAAGAAAGGAGAGGTTTTGGATGTTATTGGGCCTACTACTTGTGATATATCTATGGATGAGAGTAGGGAGATTGTTCAAGGGGTGTCTCAAGATATGCTAGAGACGGCTATTCCACGACGAGGGGGGCCTGTTCTTGTATTGTCTGGTAAACACAAGGGTGCCTTTGGGAGTCTTGTTGAGAGGGATTTGGATAGGGAGATTGGTATAGTTAGGGATGCTGATACCCATGAGATGCTCAGTGTCAAACTTGAGCATATGGCAGAGTATATTGGGGACCCAAGCTTATTGGGTCATTGA 1419 0.4334 MKEKLSFSLPSSKSSSKSNNSVKPSQTFHHDSSTDQQQQKQLITEFDPSKPQTLNPNPKTLIAPIENQWRPHKKMKNLDLPITDSHSSHSLTFEQDTSSISDQPADKSSYGLNLRSTDNNNNKKQQSDVVDEQPRPRASVEVSMLQKFKEDMEKLPSDQGFDEYIDVPVDGFGAALLGGYGWKEGMGIGKNAKEDIKVVQVKRRTAKEGLGFVADMPPPTSKKGERNGKLESEKRKKEERFVRIVRGRDVGLKASVVGRIGDDVLVLKVLGSGDIVEVKVDDVAELGSVEEDRCLRKLKDVKIRGRDEEKGSKSKRDEEKAPRSKRGRDEVEERRVNSNGGDKEEKGKKQVSWLTSHIRVRVVSRSFKGGRFYLKKGEVLDVIGPTTCDISMDESREIVQGVSQDMLETAIPRRGGPVLVLSGKHKGAFGSLVERDLDREIGIVRDADTHEMLSVKLEHMAEYIGDPSLLGH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01450 472 MobiDBLite consensus disorder prediction 306 349 - -
Trre2g01450 472 MobiDBLite consensus disorder prediction 211 234 - -
Trre2g01450 472 SMART kow_9 411 438 IPR005824 -
Trre2g01450 472 SMART kow_9 235 262 IPR005824 -
Trre2g01450 472 ProSiteProfiles G-patch domain profile. 169 215 IPR000467 GO:0003676
Trre2g01450 472 MobiDBLite consensus disorder prediction 1 139 - -
Trre2g01450 472 PANTHER G PATCH AND KOW-CONTAINING 1 468 IPR045166 GO:0000398
Trre2g01450 472 MobiDBLite consensus disorder prediction 81 127 - -
Trre2g01450 472 Pfam G-patch domain 156 214 IPR026822 -
Trre2g01450 472 Gene3D - 357 411 - -
Trre2g01450 472 SMART G-patch_5 167 213 IPR000467 GO:0003676
Trre2g01450 472 MobiDBLite consensus disorder prediction 7 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01450 Trre-Chr2 11650290 11651708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01450 353 439 C2H2 Transcription Factor Family AT1G55460 32.184 1.71e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01450 K13101 - gmx:100784983 501.13