Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01442 ATGGGTTGGCCTTACTTTGGAGAGACTCTCAAACTCTACACACAAAATCCAAATTCCTTCTTCTCCACAAGGCAGAAAAGGTATGGAGATATATTCAAGACACACATACTAGGTTGTCCTTGTGTGATGATATCAAGTCCTGAGGCAGCTAGAACAGTGCTAGTGACACAAGCAAATCTTTTCAAACCTACATACCCTCCAAGCAAAGAGAAAATGATAGGACCAGAAGCTTTGTTCTTTCAACAAGGTGCTTATCATTCCATGCTCAAAAAGCTAGTTCAAGCCTCTTTTTTACCTTCAACAATTAAAAATTCTGTCTCTCATGTGGACCAAATTGTACAAAAAATGATTCCAACTTGGGCTAATAGAACAATCAACACCTTGGAAGAGATGAAAAAGTATGCTTTTGAAGTGGCTGCAAATTCAGCATTTGGAGAAATAAAGGAGTTGGAAATGGAAGAAATAAGAGATTTGTATAGTTGCTTGGTGAAGGGCTATAACTCTTATCCTTTGCATATTCCAGGAACATCTTATTGGAAGGCAATGAAGGCAAGGAAGATTTTGAATGAGAGTATAAATAAGATAATAGAAAGAAGAAAGGAGAGCAGGAATTATGGTGGTGGGTTGTTAGGAATTCTGTTGAGAGGCAGAGGTGATGAGAAAAAGTACCAACTCACTGACTCTCAGGTTGCTGATAATCTCATTGGTGTCATCTTTGCTGCACATGACACAACAGCTAGTGTTCTAACATGGGTTCTAAAGTACTTGCATGACAATCTCAATCTCTTGGAAACTGTCACAAAAGAACATGAAGCAATAAAAGACAAACTTGTTAAGGAAGATCGTGGCCTTACATGGGAGGATACCAGGCAGATGCCCTTCACTAGCAGGGTAATCCAAGAGACATTAAGAAGTGCAAGCATACTATCATTCACATTTAGAGAAGCAGTAAGAGATGTGGTGTTAGAAGGTTACACCATTCCAAAGGGTTGGAAAGTCCTTCCACTCTTTAGAACCATTCACCATTCACCTAATTTCTTTCCTCATCCAGACAAATTTGATCCTTCAAGATTCGAGGTTCCACCTCGACCAAACACATATATGCCATTTGGAAATGGAGTCCACACTTGTCCAGGTAGTGAGCTGGCTAAGCTTGAAGTTCTTGTCCTCCTTCACCATCTCACCCTTTCATACAGGTGGGAAGTTGTGGGAAATGGAGATGGAATTCAATATGGTCCCTTTCCTGTGCCAAAACATGGATTACCAGTAAAGATAATTTTGAAGAAGAACTAG 1293 0.3983 MGWPYFGETLKLYTQNPNSFFSTRQKRYGDIFKTHILGCPCVMISSPEAARTVLVTQANLFKPTYPPSKEKMIGPEALFFQQGAYHSMLKKLVQASFLPSTIKNSVSHVDQIVQKMIPTWANRTINTLEEMKKYAFEVAANSAFGEIKELEMEEIRDLYSCLVKGYNSYPLHIPGTSYWKAMKARKILNESINKIIERRKESRNYGGGLLGILLRGRGDEKKYQLTDSQVADNLIGVIFAAHDTTASVLTWVLKYLHDNLNLLETVTKEHEAIKDKLVKEDRGLTWEDTRQMPFTSRVIQETLRSASILSFTFREAVRDVVLEGYTIPKGWKVLPLFRTIHHSPNFFPHPDKFDPSRFEVPPRPNTYMPFGNGVHTCPGSELAKLEVLVLLHHLTLSYRWEVVGNGDGIQYGPFPVPKHGLPVKIILKKN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01442 430 SUPERFAMILY Cytochrome P450 2 426 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 PRINTS E-class P450 group I signature 336 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 PRINTS E-class P450 group I signature 367 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 PRINTS E-class P450 group I signature 296 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 PRINTS E-class P450 group I signature 229 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 PRINTS E-class P450 group I signature 377 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 PANTHER CYTOCHROME P450 26 1 417 - -
Trre2g01442 430 Pfam Cytochrome P450 3 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 Gene3D Cytochrome P450 1 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 370 379 IPR017972 GO:0005506|GO:0016705
Trre2g01442 430 PRINTS P450 superfamily signature 240 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 PRINTS P450 superfamily signature 297 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 PRINTS P450 superfamily signature 368 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01442 430 FunFam Abscisic acid 8 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01442 Trre-Chr2 11604820 11618137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01442 1 423 Cytochrome P450 AT3G19270 58.255 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01442 K09843 - gmx:100782541 732.635