Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01441 ATGCAACTTTTCACATTACTTACTAATTCTTGTTTAAATTTTTCTCTCCTCTTTCTTTTTTGTTTTTTTATTCTACTTCCTTTCCTTCAATGGTGGAAACACCATAGAATCAAAGAGAAATGTTTACCCCCTGGTTCAATGGGTTGGCCTTACTTTGGAGAGACTCTCAAACTCTACACACAAAATCCAAATTCCTTCTTCTCCACAAGGCAGAAAAGGTATGGAGATATATTCAAGACACACATACTAGGTTGTCCTTGTGTGATGATATCAAGTCCTGAGGCAGCTAGAACAGTGCTAGTGACACAAGCAAATCTTTTCAAACCTACATACCCTCCAAGCAAAGAGAAAATGATAGGACCAGAAGCTTTGTTCTTTCAACAAGGTGCTTATCATTCCATGCTCAAAAAGCTAGTTCAAGCCTCTTTTTTACCTTCAACAATTAAAAATTCTGTCTCTCATGTGGACCAAATTGTACAAAAAATGATTCCAACTTGGGCTAATAGAACAATCAACACCTTGGAAGAGATGAAAAAGTATGCTTTTGAAGTGGCTGCAAATTCAGCATTTGGAGAAATAAAGGAGTTGGAAATGGAAGAAATAAGAGATTTGTATAGTTGCTTGGTGAAGGGCTATAACTCTTATCCTTTGCATATTCCAGGAACATCTTATTGGAAGGCAATGAAGGCAAGGAAGATTTTGAATGAGAGTATAAATAAGATAATAGAAAGAAGAAAGGAGAGCAGGAATTATGGTGGTGGGTTGTTAGGAATTCTGTTGAGAGGCAGAGGTGATGAGAAAAAGTACCAACTCACTGACTCTCAGGTTGCTGATAATCTCATTGGTGTCATCTTTGCTGCACATGACACAACAGCTAGTGTTCTAACATGGGTTCTAAAGTACTTGCATGACAATCTCAATCTCTTGGAAACTGTCACAAAAGAACATGAAGCAATAAAAGACAAACTTGTTAAGGAAGATCGTGGCCTTACATGGGAGGATACCAGGCAGATGCCCTTCACTAGCAGGGTAATCCAAGAGACATTAAGAAGTGCAAGCATACTATCATTCACATTTAGAGAAGCAGTAAGAGATGTGGTGTTAGAAGGTTACACCATTCCAAAGGGTTGGAAAGTCCTTCCACTCTTTAGAACCATTCACCATTCACCTAATTTCTTTCCTCATCCAGACAAATTTGATCCTTCAAGATTCGAGGTTCCACCTCGACCAAACACATATATGCCATTTGGAAATGGAGTCCACACTTGTCCAGGTAGTGAGCTGGCTAAGCTTGAAGTTCTTGTCCTCCTTCACCATCTCACCCTTTCATACAGGTGGGAAGTTGTGGGAAATGGAGATGGAATTCAATATGGTCCCTTTCCTGTGCCAAAACATGGATTACCAGTAAAGATAATTTTGAAGAAGAACTAG 1431 0.3899 MQLFTLLTNSCLNFSLLFLFCFFILLPFLQWWKHHRIKEKCLPPGSMGWPYFGETLKLYTQNPNSFFSTRQKRYGDIFKTHILGCPCVMISSPEAARTVLVTQANLFKPTYPPSKEKMIGPEALFFQQGAYHSMLKKLVQASFLPSTIKNSVSHVDQIVQKMIPTWANRTINTLEEMKKYAFEVAANSAFGEIKELEMEEIRDLYSCLVKGYNSYPLHIPGTSYWKAMKARKILNESINKIIERRKESRNYGGGLLGILLRGRGDEKKYQLTDSQVADNLIGVIFAAHDTTASVLTWVLKYLHDNLNLLETVTKEHEAIKDKLVKEDRGLTWEDTRQMPFTSRVIQETLRSASILSFTFREAVRDVVLEGYTIPKGWKVLPLFRTIHHSPNFFPHPDKFDPSRFEVPPRPNTYMPFGNGVHTCPGSELAKLEVLVLLHHLTLSYRWEVVGNGDGIQYGPFPVPKHGLPVKIILKKN 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01441 476 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01441 476 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01441 476 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01441 476 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01441 476 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01441 476 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01441 476 FunFam Abscisic acid 8 32 473 - -
Trre2g01441 476 PANTHER CYTOCHROME P450 26 38 463 - -
Trre2g01441 476 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01441 476 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01441 476 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01441 476 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01441 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Trre2g01441 476 Gene3D Cytochrome P450 33 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01441 476 Pfam Cytochrome P450 43 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01441 476 SUPERFAMILY Cytochrome P450 36 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01441 Trre-Chr2 11604682 11618137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01441 42 469 Cytochrome P450 AT3G19270 58.741 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01441 K09843 - gmx:100782541 761.525