Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01439 ATGTCTTCAACCATAGTAAACTTGTTTTCTCACATTCTCTCACTTTTAAAAAATATTCAACTCATTGAGATTATTATTGCATCCATAGTTTTCATAATCATTCATTCCTTGAGATCCAAGAAAGATCATGGCCTAATCAATTGGCCTATCTTTGGAATGTTACCTTCATTAATCATTGGACTCAAAACCAGTAACATGTATGAAAGACTAACTGATATACTTATACATCAAAATGGAACCTTTAGATTCAAAGGACCATGGTTCACTAGTCTCAATTGTGTCGTAACCTCGGAACCGCAAAATGTAGAACATCTTCTCAAAACAAGGTTTACTAATTTCCCTAAAGGAAATTGTGTTAAAGACACAGTTTCTGATTTACTTGGAGACGGTATTTTCGCTGCAGATAATGAAACATGGCAGAAACAAAGAAAAACAGCGAGTATCGAGTTTCATTCAACAAAGTTTAGGAAATTAACAATTGAGTCATTGTTTGAGCTTGTGAATAATAGGCTCATACCTGTCTTAGATTCGTCTTTTAAGAAATCGGTTTCGATTGATCTTCAAGATATTTTGTTGAGATTAACTTTTGATAATGTTTGTATGATTGCTTTTGGTGTTGATCCTGGTTGTTTACAACCTCATTTACCTGTAATACCTTTTGCAGCAGCTTTTGAAGATGCAACAGAAGCTATTTTGCTTCGATTTCCGACGCTGGCTTGTGTATGGAAAACTATGAGGTTTCTTAACTTAGGTATAGAAAGAAAGTTGAAGAAATCAATACAAAAAGTTGATGAATTTGCTGATAATGTCATAAGTGAAAGAAAGAAAGAACTATCTTTGGAAAATGAACATGATGTTGATGATGATACGCGAAAATCGGATTTGTTAACTGTTTTTATGAGGCTTAAAGATGAGAATGGAATGGCTTATTCAGATAAGTTCTTGAGGGATATATGTGTGAATTTTATATTAGCTGGGAGAGATACTTCTTCTGTTGCTTTAAGCTGGTTTTTTTGGTTGATAGATCAGAATCATGAAGTGGAGGAGAAAATATTAGAAGAGATTTGCAGGGTTGTGAGTGAGAGAGAGGAGATTAAGAAGGAAGAATTTGATAATAATTGTTTGAGATTCATGCCTGAGGAGATTAAGAAAATGGATTATTTGCATGCTGCTCTTTCAGAAGCTCTTAGATTGTATCCTTCTGTGCCTATGGATCATAAGGAGGTGGTAGAAGATGATAAATTCCCAGATGGAACAGAACTAAAGAAAGGAACAAAAGTGATATATGCAATATATTCAATGGGAAGAATGAAAAGCATATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAAAGATGGTTAACTAAAGAAGGTAATTTCATGAGTGAATCTGCATACAAATTCACTGCTTTTAATGGAGGACCAAGATTGTGTTTAGGCAAAGATTTTGCATACTATCAAATGAAATATGTTGCAGCTAGCATTATATTTCATTACCATGTTAAGGTTGTTGAGACTCATCCTATTGTCCCTAAACTTTCTTTGACACTTTACATGAAGCATGGATTGAAAGTTAATCTTCATAGGCGTTGTAATGAAGAGATTGGTAAATATTTGAAGTTAATTAGTTAG 1632 0.3388 MSSTIVNLFSHILSLLKNIQLIEIIIASIVFIIIHSLRSKKDHGLINWPIFGMLPSLIIGLKTSNMYERLTDILIHQNGTFRFKGPWFTSLNCVVTSEPQNVEHLLKTRFTNFPKGNCVKDTVSDLLGDGIFAADNETWQKQRKTASIEFHSTKFRKLTIESLFELVNNRLIPVLDSSFKKSVSIDLQDILLRLTFDNVCMIAFGVDPGCLQPHLPVIPFAAAFEDATEAILLRFPTLACVWKTMRFLNLGIERKLKKSIQKVDEFADNVISERKKELSLENEHDVDDDTRKSDLLTVFMRLKDENGMAYSDKFLRDICVNFILAGRDTSSVALSWFFWLIDQNHEVEEKILEEICRVVSEREEIKKEEFDNNCLRFMPEEIKKMDYLHAALSEALRLYPSVPMDHKEVVEDDKFPDGTELKKGTKVIYAIYSMGRMKSIWGKDCLEFKPERWLTKEGNFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIFHYHVKVVETHPIVPKLSLTLYMKHGLKVNLHRRCNEEIGKYLKLIS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01439 543 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01439 543 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01439 543 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01439 543 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01439 543 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01439 543 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01439 543 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01439 543 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01439 543 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01439 543 FunFam Cytochrome P450 36 533 - -
Trre2g01439 543 PANTHER CYTOCHROME P450 33 525 - -
Trre2g01439 543 SUPERFAMILY Cytochrome P450 46 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01439 543 Pfam Cytochrome P450 47 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01439 543 CDD CYP86A 81 523 - -
Trre2g01439 543 Gene3D Cytochrome P450 43 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01439 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01439 Trre-Chr2 11594267 11597944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01439 8 538 Cytochrome P450 AT5G23190 67.797 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01439 K15402 - gmx:100809503 796.964