Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01415 ATGGCTCATGGTGGACCGTTAGAAATTAAAAGAGTCCTCAAATTATATAAAGGATTTGAGGGACTCTCAACATTGGTTGATGTTGGAGGAGGAATAGGAGAGACCTTAAAAGTCATTATATCTCAATATCCTTCAATTAAAGGAATTAATTTTGATTTGCAACAAGTCATTCAAGATGCACCTTCTCACCCAGGGATAGAGCATGTTGGAGGAGATATGTTTGAAAGTGTTCCAACTGGTGATGCCATTTTACTAAAGCTTGTATGTCATAATTGGGGAGATGAAGAATGTGTGAAGTTTTTGAAAAATTGTCACAAAGCTCTGCCAAAACATGGGAAAGTGATTATTTTGGATTATATCATTCCTGAGGTGCCAAATCCAAGCAATATGTCTAAGCATGTTTGTGATATTGACAATCTCATGTTTTTAGTAACAACTGGAAAGGAAAGAACTGAGGAAGAATTTGAGAGCTTATGTAAGAAATCTGGATTTTCTAAATTTCATGTTGCTTGCAGTGAATTCTCAGCCATGTCAGCAGTGATGGAATTTTATAAATAA 558 0.3548 MAHGGPLEIKRVLKLYKGFEGLSTLVDVGGGIGETLKVIISQYPSIKGINFDLQQVIQDAPSHPGIEHVGGDMFESVPTGDAILLKLVCHNWGDEECVKFLKNCHKALPKHGKVIILDYIIPEVPNPSNMSKHVCDIDNLMFLVTTGKERTEEEFESLCKKSGFSKFHVACSEFSAMSAVMEFYK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01415 185 PANTHER O-METHYLTRANSFERASE 9 174 IPR016461 GO:0008168
Trre2g01415 185 Pfam O-methyltransferase domain 7 165 IPR001077 GO:0008171
Trre2g01415 185 Gene3D Vaccinia Virus protein VP39 1 185 IPR029063 -
Trre2g01415 185 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 185 IPR016461 GO:0008168
Trre2g01415 185 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 signature 2. 18 33 IPR022657 -
Trre2g01415 185 CDD AdoMet_MTases 24 121 - -
Trre2g01415 185 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 7 171 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01415 Trre-Chr2 11356288 11357348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01415 1 174 Monolignol Biosynthesis Gene Families AT5G54160 59.429 5.44e-73 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01415 - - vun:114170340 299.671