Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01414 ATGAGTTTTAATTCTAAACAAAATAATAATCTTCCTATCAATGTGGTAGAAAAGGTTGATGATGCTTACCTTTCAGCATTAATATTATGTTTTAGTAGGATTTTTCCTGCAATACTAAATGCTGCTGTTGATCTCAATTTATTTGATATCATAGCTAAATTACAAAATTCAAGTGGTAGTAATAATTCTAGCTTTTCTGCTTCTGAAATTGCTTCTCAGCTTCCAAATCAACACACTGAATTGGCTGAGAGGCTTGAACGCATGTTGAATGTGTTGGCTAGCTATTCTCTTCTCAATTGTTCAATTCGTACAAATGAAGATGGTAAGAGAGAAAGAGTTTTTGGTCTCTCTTCAATTGGTCAATACTTTGCATTTGATAAAGATGGAGGCTCTTTGGGTCCACTCTCAACATTAATCCATAGAGGATGCAGCAGTGTTTGGGGTAATGTAAAGGATGCAATTTTGGATCCTAATGTGAAAAATCTTTTCCAAAGTATCAACGGGACATCATTTTATCAATATACAAAGACAAATAATGAATTGAATGATATTACTAACAAAGCAATGGCTCATGGTGGACCGTTAGAAATTAAAAGAGTCCTCAAATTATATAAAGGATTTGAGGGACTCTCAACATTGGTTGATGTTGGAGGAGGAATAGGAGAGACCTTAAAAGTCATTATATCTCAATATCCTTCAATTAAAGGAATTAATTTTGATTTGCAACAAGTCATTCAAGATGCACCTTCTCACCCAGGGATAGAGCATGTTGGAGGAGATATGTTTGAAAGTGTTCCAACTGGTGATGCCATTTTACTAAAGCTTGTATGTCATAATTGGGGAGATGAAGAATGTGTGAAGTTTTTGAAAAATTGTCACAAAGCTCTGCCAAAACATGGGAAAGTGATTATTTTGGATTATATCATTCCTGAGGTGCCAAATCCAAGCAATATGTCTAAGCATGTTTGTGATATTGACAATCTCATGTTTTTAGTAACAACTGGAAAGGAAAGAACTGAGGAAGAATTTGAGAGCTTATGTAAGAAATCTGGATTTTCTAAATTTCATGTTGCTTGCAGTGAATTCTCAGCCATGTCAGCAGTGATGGAATTTTATAAATAA 1122 0.3431 MSFNSKQNNNLPINVVEKVDDAYLSALILCFSRIFPAILNAAVDLNLFDIIAKLQNSSGSNNSSFSASEIASQLPNQHTELAERLERMLNVLASYSLLNCSIRTNEDGKRERVFGLSSIGQYFAFDKDGGSLGPLSTLIHRGCSSVWGNVKDAILDPNVKNLFQSINGTSFYQYTKTNNELNDITNKAMAHGGPLEIKRVLKLYKGFEGLSTLVDVGGGIGETLKVIISQYPSIKGINFDLQQVIQDAPSHPGIEHVGGDMFESVPTGDAILLKLVCHNWGDEECVKFLKNCHKALPKHGKVIILDYIIPEVPNPSNMSKHVCDIDNLMFLVTTGKERTEEEFESLCKKSGFSKFHVACSEFSAMSAVMEFYK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01414 373 Gene3D - 34 200 IPR036388 -
Trre2g01414 373 FunFam Caffeic acid 3-O-methyltransferase 4 123 - -
Trre2g01414 373 PANTHER O-METHYLTRANSFERASE 32 362 IPR016461 GO:0008168
Trre2g01414 373 Gene3D Vaccinia Virus protein VP39 182 360 IPR029063 -
Trre2g01414 373 Pfam O-methyltransferase domain 147 353 IPR001077 GO:0008171
Trre2g01414 373 Pfam Dimerisation domain 38 93 IPR012967 GO:0046983
Trre2g01414 373 CDD AdoMet_MTases 212 309 - -
Trre2g01414 373 FunFam Uncharacterized protein 125 373 - -
Trre2g01414 373 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 373 IPR016461 GO:0008168
Trre2g01414 373 PIRSF O-mtase 3 373 IPR016461 GO:0008168
Trre2g01414 373 SUPERFAMILY "Winged helix" DNA-binding domain 19 126 IPR036390 -
Trre2g01414 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 145 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01414 Trre-Chr2 11356288 11360139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01414 12 362 Monolignol Biosynthesis Gene Families AT5G54160 46.176 2.52e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01414 - - aprc:113869089 517.694