Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01404 ATGAAGGAAGGGTTGGAAAAGGGCGAAATTGTTGAAAAATATATTAGAGACACTGCAGTTAATCTTTTAATTGCAGGAAATGGAACAATTAGTTCAGGTCTCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTAGAAGCCAAAATCATTCAAGAGATCAAAGATAATTGTTTAACACACGACGCGAATTTGATCAATAATTTAAGTGTAGAAGTGCTTGATAAGCTAGTTTACCTTAATGGAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCTCTAGCATATCAACACAAATGTGCAATCAAAAATGATATACTACCTAGTGGACACTATGTTAATCCAAATACAAAGTTAATATACTCTTTATATGCAATGGGAAGGATGGAACAAATTTGGGGACAAGATTGCTTGGAATTTAAGCCAGAGAGATGGATATCAGATAGAGGACAAATTATAAAAGTACCATCTTACCAGTTCATAGCATTCAATGCAGGTCCAAGAAGTTGTCTTGGGAAAGATTTTTTTTTTTTTTGA 540 0.3426 MKEGLEKGEIVEKYIRDTAVNLLIAGNGTISSGLSWFFWLVSTHPIVEAKIIQEIKDNCLTHDANLINNLSVEVLDKLVYLNGAICEALRLYPPLAYQHKCAIKNDILPSGHYVNPNTKLIYSLYAMGRMEQIWGQDCLEFKPERWISDRGQIIKVPSYQFIAFNAGPRSCLGKDFFFF 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01404 179 Gene3D Cytochrome P450 1 178 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01404 179 PRINTS E-class P450 group IV signature 78 94 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01404 179 PRINTS E-class P450 group IV signature 171 179 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01404 179 PRINTS E-class P450 group IV signature 16 42 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01404 179 PRINTS E-class P450 group IV signature 129 147 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01404 179 PRINTS E-class P450 group IV signature 155 171 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01404 179 Pfam Cytochrome P450 9 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01404 179 PANTHER CYTOCHROME P450 9 178 - -
Trre2g01404 179 PRINTS P450 superfamily signature 25 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01404 179 PRINTS P450 superfamily signature 171 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01404 179 PRINTS P450 superfamily signature 83 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01404 179 PRINTS P450 superfamily signature 162 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01404 179 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 164 173 IPR017972 GO:0005506|GO:0016705
Trre2g01404 179 SUPERFAMILY Cytochrome P450 7 176 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01404 Trre-Chr2 11271346 11271885 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01404 12 175 Cytochrome P450 AT2G23180 51.220 8.93e-63 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01404 - - cam:101494575 280.026