Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01402 ATGACCTTGTTTCATTATATTACATTATTTTTAGCCACAAGTCTCTTTATCATTTTATACAATATATGGAGACGCAACAAAAATGTACTTTCACCAAATTGGCCAATAATTGGCATGCTACCATCACTTTTATATAATCAATCCAATATGCATGATTTTACAGCCTTACTTTTGAAACATTATGGTGGCACTTTTCATTTTAAAGGACCTTGGTTCACAAATATTGCCAACTTTACCCTCACTGGTGATCCCATGAATGTGCACCACATCCTCAGCAAGAATTTCACCAACTATGGAAAAGGATCTGATTTCCATGAGATTTTTGAAATTCTTGGTGTTGGTATTTTCAATTTGGATTCTAATGAATGGAAACAAGAAAGGACACTACTTCATTCGATTCTCAAAAGGAAAAACTTTGAGATATTCAATCAACAAAACATTCAAAAGAAGCTAGAGAATTGTCTATTACCATTTCTTGATCAAGCATCCAAAGGTAAACAAGTACTTGATTTACATAATGTTATTGAAAGATTCACCTTTGATATTACTTGTACTTTTATTTTTGGATTCGATCCTAATTGTCTTTACAAATTCGATGAGATATCCGATGTTAATTCTTGTGTAAAAGCTATTTCTGTGATTGAGGATATGTTATTGTCTAGACATTGTATTCCAAAGTATATTTGGAAGCTAGAAAAATGGCTACAAATTGGTCAAGCTAAGGAGAATAAGGTAGCTCAAGAAAATGTTCATCGATTCTTAAACAACTGTATATCTTGTTACAAAGACGATGATGAAGCGGAAGACGAATCTCCTTCATGCTTGTTAAAAGAACTAATGAAAGAAGGATTGGGAAAGGGTGAAATGACTAAGGAGTATATTAGAGACACAACACTAAATCTCTTGGCGGCTGGAAATGGAACAGTTAGTTCTGGTATCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTAGAAGCTAAAATTATTCAAGAGATCAAAGATAAATGTTTAACACAAGAGAAGAATTCGATCACGGATTTAAGTGTTCAAGAGCTTGATAAGCTAGTTTACCTTCATGGAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCTATACCATTCGAACACAAGTGCGCGGTTAAATCCGATATACTACCTAGCGGAGACCATATTAGTCCAAATACAAAGTTAATATATTCCTTGTATGCAATGGGAAGATTGGAGCAAATATGGGGTGACAATTGCTCGGAATTTAAGCCAGAGAGATGGATATCAGATAAAGGACAAATTAAACAAGTTCCGTCTTATAAGTTCATTGCATTCAATGCAGGTCCAAGAAGTTGTATTGGTAAAGATATAACTTTTGTTCAAATGAAAATGGTTGTAGCTACAGTGTTGTGGAAGTTTCACATACAAGCAGTGGAAGGTCAATCTATCATTCCTAGGGTTTCGATGGTTCTTCGTATGAAACATGGATTTAAGGTCAATGTTAGTAAAAGATGCATTTGA 1515 0.3432 MTLFHYITLFLATSLFIILYNIWRRNKNVLSPNWPIIGMLPSLLYNQSNMHDFTALLLKHYGGTFHFKGPWFTNIANFTLTGDPMNVHHILSKNFTNYGKGSDFHEIFEILGVGIFNLDSNEWKQERTLLHSILKRKNFEIFNQQNIQKKLENCLLPFLDQASKGKQVLDLHNVIERFTFDITCTFIFGFDPNCLYKFDEISDVNSCVKAISVIEDMLLSRHCIPKYIWKLEKWLQIGQAKENKVAQENVHRFLNNCISCYKDDDEAEDESPSCLLKELMKEGLGKGEMTKEYIRDTTLNLLAAGNGTVSSGISWFFWLVSTHPIVEAKIIQEIKDKCLTQEKNSITDLSVQELDKLVYLHGAICEALRLYPPIPFEHKCAVKSDILPSGDHISPNTKLIYSLYAMGRLEQIWGDNCSEFKPERWISDKGQIKQVPSYKFIAFNAGPRSCIGKDITFVQMKMVVATVLWKFHIQAVEGQSIIPRVSMVLRMKHGFKVNVSKRCI 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01402 504 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01402 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01402 504 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01402 504 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01402 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01402 504 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01402 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01402 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01402 504 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01402 504 SUPERFAMILY Cytochrome P450 20 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01402 504 CDD CYP86A 65 495 - -
Trre2g01402 504 PANTHER CYTOCHROME P450 20 497 - -
Trre2g01402 504 Gene3D Cytochrome P450 16 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01402 504 Pfam Cytochrome P450 32 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01402 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01402 Trre-Chr2 11263876 11265390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01402 1 502 Cytochrome P450 AT2G23180 39.265 1.29e-138 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01402 - - cam:101494575 687.182