Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01398 ATGAAAAAGTTCGAGACATCCGCTCAACAAAACATTCGTAAGAAGTTAGAGAATTGCCTATTACCATTTGTTGATCATCATGCATCAACAAAAGGTGTACAAGTATTTGATTTACAAGATATTCTTGAGAGGTTCACCTTTGATATTACTTGTACTTTTTTATTTGGATTTGATCCTAATTCTCTTCCTTTCAAGTTCAATGAGTTACCAGATATCGCGTTACCAGCAGATATCGCTTGTACAAATGCTATTTCCTTGCTTGAGGATATGACAACGTCGAGACACTATATTCCAAAATGTATTTGGAAGCTACAAAAATACATTTATAATTGTATAACTTCTAACAAATGTAATGAAGATGTGGATGAATCTTCTTCTTACTTGGTAAAAGAACCTATGAAGGAAGGGTTGGGAAAGGGCGAAAAGGCCGAGGAGTATATTAGAGACACATCACTAAATCTCTTGGCGGCAGGAAATGGAACAGTTAGTTCTGGTATCAGTTGGTTATTTTGGCTTGTTTAA 522 0.3525 MKKFETSAQQNIRKKLENCLLPFVDHHASTKGVQVFDLQDILERFTFDITCTFLFGFDPNSLPFKFNELPDIALPADIACTNAISLLEDMTTSRHYIPKCIWKLQKYIYNCITSNKCNEDVDESSSYLVKEPMKEGLGKGEKAEEYIRDTSLNLLAAGNGTVSSGISWLFWLV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01398 173 SUPERFAMILY Cytochrome P450 7 172 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01398 173 PANTHER CYTOCHROME P450 2 173 - -
Trre2g01398 173 Pfam Cytochrome P450 11 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01398 173 Gene3D Cytochrome P450 1 173 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01398 Trre-Chr2 11232389 11232910 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01398 15 173 Cytochrome P450 AT4G39480 30.811 4.72e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01398 - - cam:101494575 152.525