Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01393 ATGGGAAGATTGAAACGAATATGGGGTAAGGATTCCTTGGAATTTAAGCCAGAGAGATGGATATCAGATAAAGGACAAATTATACATGAACCGTCTTACAAGTTCATAGCATTCAATGCAGGTCCAAGAAGTTGTCTTGGGAAAGATATTAGAGTTGTTCAAATGAAAATGGTTGCAGCTCTTATGTTATGGAATTTTCGTATACAGGTTGTGGAAGGTCATTCTGTAACTCCAAGGATTTCTATTCTTCTTCGTATGAAACATGGCTTAAAGGTTAAAGTTAGTAAAAGATGCATTTGA 300 0.3567 MGRLKRIWGKDSLEFKPERWISDKGQIIHEPSYKFIAFNAGPRSCLGKDIRVVQMKMVAALMLWNFRIQVVEGHSVTPRISILLRMKHGLKVKVSKRCI 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01393 99 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 38 47 IPR017972 GO:0005506|GO:0016705
Trre2g01393 99 Gene3D Cytochrome P450 1 98 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01393 99 Pfam Cytochrome P450 3 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01393 99 SUPERFAMILY Cytochrome P450 1 97 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01393 99 PANTHER CYTOCHROME P450 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01393 Trre-Chr2 11200225 11200524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01393 1 99 Cytochrome P450 AT4G39480 60.606 1.55e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01393 - - jre:108984016 160.229