Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01392 ATGTCTTTGTTTCAGTATATTACATTATTTGTAGCCATTCTCTTCATCATATTTTACAATATTTGGAGACACAATAGAAATGTTATTGCACCAAATTGGCCAATAATTGGCATGTTACCATCAGTTTTGCATAATCAATCCAATATTCATGATTATGCAACCTTAGTTTTGAAACATTATGGTGGCACTTTTCATTTCAAAGGACCTTGGTTCACAAACATTGCCAACTTTATCCTCACTAGTGATCCAATGAATGTGCACCATATCCTTAGCAAGAATTTCAGCTATTATGAGAAAGGATCTGATTTCCATGAGATTTTTGAAGTTCTTGGTATTGGTATTTTCAATTTGGATTCTAATGAATGGAAACAAGAAAGGATAAGGCTTCATTCATTGCTCAAAATGAAAAACATTGAAATATTCCATCAAAAAAATATTCAAAAGAAGCTAGAGAATTGCTTATTGCCATTTCTTGATCATGCATCCAATAGTGAACAAGAACTTGATTTACAAGATATTCTTGAGAGATTCACCTTTGATATTACTATCAATTTTTTATTTGGATATGATCCTAATTCTCTTCCTTTCAAATTTAATGAGTTATCAAATATTGCTTATGTAAAAGCTATTTCTGTGTTTGAGGATACGTTATTGTCGAGGCACTATATTCCGAAATGTATTTGGAAATTACAAAGATGGCTACAAATTGGTCAAGAAAAGAAGGGCAAGGTAGCTAGTGAAAATATTAACCAATTCTTGTGCAAATGTTTAACTTATTACAAAGATAATGAAGAGAAAAAAAGATTGAGAAGTAGCGAAGATGTGGACGAAAGTGATTCTTGCTTGGTAAATGGATTAATGAAGGAAGCCTTGGAAAAGGGAGAAATGCTTGAGAAGTATGTTAGAGATACTGCAGCAAATCTATTGGGTGCAGGAAATGGAACAATTAGTTCAAGTTTGACTTGGTTCTTGTGGATTCTTTCAACTCATCCTATTGTGGAAGCTAAAATTATTGAAGAAATTTGTGATAATTGTATAAAACATGAGGAGAATTTGATAAGTAATTTAAGCATGGAAAATCTTGATAAGCTAGTGTACCTTCATGGAGCTATATGTGAAACTCTAAGGCTTTATCCTCCTCTAACATTTGAACACAAGTGTGCAATTAAATCAGATATACTACCTAGTGGAGACCATGTTAAGCCAAATACAAAGTTAATATATTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGGGAGAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATATCAAATAGAGGAAAAATTATACATGTACCGTCTTACAAGTTTATAGCTTTCAATACAGGTCCTAGAAGTTGTTTGGGTAAAGATATTAGCTTTTTTCAAATGAAGATGGTTGTGGTTGCTTTGTTATGGAATTTTCACATACAAGTAGTTGAAGGTCACAATGTAACTCCAAGGGCTTCTATTGTACTTCGCATGAAACATGGCTTGAAAGTCAAAGTTAGTAAAAGATACATTTGA 1536 0.3268 MSLFQYITLFVAILFIIFYNIWRHNRNVIAPNWPIIGMLPSVLHNQSNIHDYATLVLKHYGGTFHFKGPWFTNIANFILTSDPMNVHHILSKNFSYYEKGSDFHEIFEVLGIGIFNLDSNEWKQERIRLHSLLKMKNIEIFHQKNIQKKLENCLLPFLDHASNSEQELDLQDILERFTFDITINFLFGYDPNSLPFKFNELSNIAYVKAISVFEDTLLSRHYIPKCIWKLQRWLQIGQEKKGKVASENINQFLCKCLTYYKDNEEKKRLRSSEDVDESDSCLVNGLMKEALEKGEMLEKYVRDTAANLLGAGNGTISSSLTWFLWILSTHPIVEAKIIEEICDNCIKHEENLISNLSMENLDKLVYLHGAICETLRLYPPLTFEHKCAIKSDILPSGDHVKPNTKLIYSLYAMGRMEQIWGEDCLEFKPERWISNRGKIIHVPSYKFIAFNTGPRSCLGKDISFFQMKMVVVALLWNFHIQVVEGHNVTPRASIVLRMKHGLKVKVSKRYI 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01392 511 SUPERFAMILY Cytochrome P450 19 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01392 511 CDD CYP86A 64 502 - -
Trre2g01392 511 Pfam Cytochrome P450 31 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01392 511 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01392 511 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01392 511 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01392 511 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01392 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Trre2g01392 511 Gene3D Cytochrome P450 16 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01392 511 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01392 511 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01392 511 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01392 511 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01392 511 PANTHER CYTOCHROME P450 21 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01392 Trre-Chr2 11194719 11196254 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01392 1 509 Cytochrome P450 AT2G23180 40.232 1.32e-143 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01392 - - cam:101494575 714.916