Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01390 ATGCTACCATCAGTTTTACTCAACCAATCCAATATTCATGATCTTCTAACCATAGGATTGAAACATTATGGTGGCACTTTTCATTTTAAAGGACCTTGGTTCACAAACATTGCCAGCTTTATCATCACCAGTGATCCCATGAATGTGCATCACATCACAAGCAAGAATTTCACCAACTATGGTAAGGGATCTGATTTCCATGAGATTTTTGAAATTTTTGGTGTTGGTATTTTCAATTTGGATTCCAATGAATGGAAACAAGAGAGAGAAATGTATCATTCATTGCTCAATAGAAAAACCTTTAAGATATTCCTTCAACAAAACATTCAAAAGAAGCTTGAGAATTGCCTATTACCATTTCTTGATCATGCATCGAAAGGTGATTTAATAATTGATTTACAAGATATTCTTGGGAGGTTCACCTTTGATATTGCTTTTACTTCTATATTTGGATTTGATCCTAATTGCCTTCCTTACAACTTCGACGAGTTACCTGAAATTCCTTTTGTAAAAGCTATTTCTGAGGTTGAAGATATGTTATTTTCGCGACACTATATTCCAAAATGTATTTGGAAGCTACAAAAATGGCTAAATATTGGTCTAGAGAAGAAGGGCAAGGTAGCTCAAGAAAATCTTTACCAATTCTTGTACAAATATATAGCTTATTACAAAGGCGATGACGAGAAAAGAAGAATGAGGAGTAGTGAAGATTTCGATGAATTTGATTCTTCCTTACTAAAAGAACTAATGAAGGAAAGATTGAGAAAGGGGGAAATGGTTGAGAGATATATTAGAGACACTGCGGTCAATATCTTGTTTGCAGGAAATGGAGCAGTTAATTCAGGTCTCAATTGGTTTTTTTGGCTTGTTTCAACTCATCCTATTGTAGAAGCTAAAATTATTCAAGAGATCAAAGATAAATGTTTAACACAAGAGAATAATTCGATCACGGATTTAAGTATTCAAGAGCTTGATAAGCTAGTTTACCTTCATGGAGCTATATGTGAAGCCCTAAGGCTATATCCTCCTCTACCATATGAACACAAGTGTGCAACTAAATCAGATATACTACCTAGTGGAGACCATGTTAAGCCAAATACAAAGTTAATATATTCTTTGTATGCAATGGGAAGGATGGAGAAAATATGGGGAGAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATATCTGATAGAGGGGAGATTAAACATGTACCATCTTACAAGTTCATATCATTCAATGCAGGTCCTAGAAAGTGTATAGGGAAAGACATGAGCTTTGTTCAAATGAAAATGATTGCAGTTGCTATGTTATGGAAGTTTCAAATAAAGGTAGTGGAAGGTCACTCTGTTACTCCAAGGGTTTCTGTAGGTCTTAGCTTGAAACATGGCCTTAAAGTCAAAGTCAATAAAAGGAGCATTTGA 1425 0.3502 MLPSVLLNQSNIHDLLTIGLKHYGGTFHFKGPWFTNIASFIITSDPMNVHHITSKNFTNYGKGSDFHEIFEIFGVGIFNLDSNEWKQEREMYHSLLNRKTFKIFLQQNIQKKLENCLLPFLDHASKGDLIIDLQDILGRFTFDIAFTSIFGFDPNCLPYNFDELPEIPFVKAISEVEDMLFSRHYIPKCIWKLQKWLNIGLEKKGKVAQENLYQFLYKYIAYYKGDDEKRRMRSSEDFDEFDSSLLKELMKERLRKGEMVERYIRDTAVNILFAGNGAVNSGLNWFFWLVSTHPIVEAKIIQEIKDKCLTQENNSITDLSIQELDKLVYLHGAICEALRLYPPLPYEHKCATKSDILPSGDHVKPNTKLIYSLYAMGRMEKIWGEDCLEFKPERWISDRGEIKHVPSYKFISFNAGPRKCIGKDMSFVQMKMIAVAMLWKFQIKVVEGHSVTPRVSVGLSLKHGLKVKVNKRSI 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01390 474 Gene3D Cytochrome P450 5 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01390 474 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01390 474 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01390 474 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01390 474 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01390 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Trre2g01390 474 PANTHER CYTOCHROME P450 2 466 - -
Trre2g01390 474 Pfam Cytochrome P450 40 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01390 474 SUPERFAMILY Cytochrome P450 6 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01390 474 PRINTS E-class P450 group IV signature 327 343 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01390 474 PRINTS E-class P450 group IV signature 378 396 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01390 474 PRINTS E-class P450 group IV signature 404 420 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01390 474 PRINTS E-class P450 group IV signature 420 438 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01390 474 CDD CYP86A 27 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01390 Trre-Chr2 11179277 11180701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01390 1 474 Cytochrome P450 AT4G39490 44.033 4.26e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01390 - - cam:101494575 645.58