Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01388 ATGAATGTGCACCACAGTCTCAGCAAGAATTTCAGCAATTATGGGAAAGGAACTGATTTCCCTGAGATTTTTGAAATATTTGGTGTTGGTATTTTCAATTTGGATTCGAATGAATGGAAACAAGAAAGGACACTACTTCATTCAATTCTCAAAACGAAAAAGTTTGAGACATCCGCTCAACAAAACATTCGTAAGAAGTTAGAGAATTGCCTATTACCATTTGTTGATCATCATGCATCAACAAAAGGTGTACAAGTATTTGATTTACAAGATATTCTTGAGAGGTTCACCTTTGATATTACTTGTACTTTTTTATTTGGATTTGATCCTAATTCCCTTCCTTACAAGTTCAATGAGTTACTAGATATCGCGTTACCAGCAGATATCGCTTGTGCAAATGCTATTTCCTTGCTTGAGGATATGACAACGTCGAGACACTATATTCCAAAATATGTGGATGAATCTTCTTCTTACTTGGTAAAAGAACTTATGAAGGAAGGGTTGGGAAAGGACGAAAAGGCCGAGGAGTATATTAGAGACACAACACTAAGTCTCTTAACTGCCGGAAATGGAACAGTTAGTTCAGGTCTCAATTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTAGAAGCTAAAATTATTCAAGAGATCAAAGATAATTGTTCTATACAAGAGGAGAATTTTGTCACAAATTTAAGATTCGAAGTGCTTGAAAAGTTAGTTTACCTTCATGGAGCTATAAGTGAAGCCTTAAGGCTTTATCCTCCTCTAGCATTTGAACACATATGTGCAATCAAATCTGATGTTCTACCTAGTGGACACCATGTTAGTCCAAATACAAAGTTAATATTCTCTATGTATGCAATGGGAAGAATGGAACAAATATGGGGACAAGATTGCTTGGAATTTAAGCCAGAGAGATGGATATCAGATAGAGGAAAAATTATAAAAGTACTATCTTACAAGTTCATGGCATTCAATGCAGGTCCTAGAAGTTGTATTGGTAAGGATATTAGCTTTGTTCAAATGAAAATGGTTGCAGCTACAGTGTTGTGGAAATTTCACATAGAGGTGGTGGAAGGTCATCATGTAACTCCAAGGGCTTGTATTGTCCTTCGCATTAAACATGGGTTGAAGGTCAAAGTTAATAAAAGATGCATTTGA 1167 0.3582 MNVHHSLSKNFSNYGKGTDFPEIFEIFGVGIFNLDSNEWKQERTLLHSILKTKKFETSAQQNIRKKLENCLLPFVDHHASTKGVQVFDLQDILERFTFDITCTFLFGFDPNSLPYKFNELLDIALPADIACANAISLLEDMTTSRHYIPKYVDESSSYLVKELMKEGLGKDEKAEEYIRDTTLSLLTAGNGTVSSGLNWFFWLVSTHPIVEAKIIQEIKDNCSIQEENFVTNLRFEVLEKLVYLHGAISEALRLYPPLAFEHICAIKSDVLPSGHHVSPNTKLIFSMYAMGRMEQIWGQDCLEFKPERWISDRGKIIKVLSYKFMAFNAGPRSCIGKDISFVQMKMVAATVLWKFHIEVVEGHHVTPRACIVLRIKHGLKVKVNKRCI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01388 388 SUPERFAMILY Cytochrome P450 3 386 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01388 388 PANTHER CYTOCHROME P450 2 381 - -
Trre2g01388 388 Gene3D Cytochrome P450 1 387 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01388 388 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 327 336 IPR017972 GO:0005506|GO:0016705
Trre2g01388 388 PRINTS E-class P450 group I signature 197 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01388 388 PRINTS E-class P450 group I signature 334 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01388 388 PRINTS E-class P450 group I signature 324 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01388 388 PRINTS E-class P450 group I signature 177 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01388 388 PRINTS P450 superfamily signature 188 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01388 388 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01388 388 PRINTS P450 superfamily signature 325 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01388 388 PRINTS P450 superfamily signature 246 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01388 388 Pfam Cytochrome P450 162 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01388 388 Pfam Cytochrome P450 7 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01388 Trre-Chr2 11163559 11170847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01388 2 386 Cytochrome P450 AT2G23180 40.371 7.05e-104 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01388 - - cam:101494575 495.352