Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01387 ATGAATGTGCACCACACCCTAAGCAAGAATTTCAGCAATTATGGGAAAGGGTTTGATTTCCATGAGATTTTTGAAATTCTTGGTGTTGCTATTCCCCTGATTGAGGATATGTTATTGTCGAGAAACTATATTCCAAAATGTATTTGGAAGATGCAAAAATGGCTACAAATTGGTCAAGAAAAGAAGAACAAGGTAGCTCAAGAAAATCTTCATCAATTCATATACAACTCCATATCATATTACAAAGGTGATGAAGATATGGATGAATCTCCTTCTTACTTACTAAAAGAACTAATGAAGGAAGGATTTAGAAAGGGCGAAATGACTAAGGAGTATATTCGAGACACAACACTAAATCTCTTGATAGCAGGAAATGGATCAGTTAGTTCGGGCCTTAGTTGGTTTTTTTCGCTTGTTTCAACTCATCCTATTGTAGAAGCTAAAATTATTCAAGAGATCAAAGATAAATGTTTAACACAAGAGGAGAATTTCGTCACGAATTTAAGTATGGAAGTGCTTGATAAGCTAGTATACCTTCATGGAGCTATAAGTGAAGCCTTAAGGCTTTATCCTCCTGTACCATTTGAGTACAAATGTGCAATTAAAGATGATACACTATCTAGTGGAGACCATGTAAGTCCAAATACAAAGTTAATATACTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGAGAGTGGATTGCTTGGAATTTAAGCCAGAGAGATGGATATCAGATAGAGGACAAATTATAAAAGTACCATCTTACAAGTTCATTGCATTCAATGCAGGTCCTAGAAGTTGTATTGGTAAAGATATGAGCTTTGTTCAAATGAAAATGGTTGCAGTTGCATTGTTATGGAAGTTCAAGATACAAGTAGTGGAAGGTCATTCTGTAACTCCAAAGACTTCTATTCTTCTTCGTATGAAACATGGTCTAAAGGTCACAGTTAGTAAAAGATGCATTTGA 972 0.3508 MNVHHTLSKNFSNYGKGFDFHEIFEILGVAIPLIEDMLLSRNYIPKCIWKMQKWLQIGQEKKNKVAQENLHQFIYNSISYYKGDEDMDESPSYLLKELMKEGFRKGEMTKEYIRDTTLNLLIAGNGSVSSGLSWFFSLVSTHPIVEAKIIQEIKDKCLTQEENFVTNLSMEVLDKLVYLHGAISEALRLYPPVPFEYKCAIKDDTLSSGDHVSPNTKLIYSLYAMGRMEQIWRVDCLEFKPERWISDRGQIIKVPSYKFIAFNAGPRSCIGKDMSFVQMKMVAVALLWKFKIQVVEGHSVTPKTSILLRMKHGLKVTVSKRCI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01387 323 Gene3D Cytochrome P450 6 322 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01387 323 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 262 271 IPR017972 GO:0005506|GO:0016705
Trre2g01387 323 PRINTS P450 superfamily signature 269 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01387 323 PRINTS P450 superfamily signature 181 192 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01387 323 PRINTS P450 superfamily signature 260 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01387 323 PRINTS P450 superfamily signature 123 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01387 323 PRINTS E-class P450 group I signature 112 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01387 323 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01387 323 PRINTS E-class P450 group I signature 132 158 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01387 323 PRINTS E-class P450 group I signature 269 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01387 323 PRINTS E-class P450 group I signature 259 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01387 323 PANTHER CYTOCHROME P450 33 316 - -
Trre2g01387 323 SUPERFAMILY Cytochrome P450 21 321 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01387 323 Pfam Cytochrome P450 51 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01387 Trre-Chr2 11117560 11118827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01387 35 323 Cytochrome P450 AT4G39490 41.503 2.29e-79 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01387 - - cam:101494575 395.971