Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01323 ATGGATCCCAATTTTTTTAACTTAAAAGTCCTTTCCTCCTTTTTCATTTTCATGCTTGTGGCACTGAAATTGGGGAAGATGATTCTCAACAAAAAAGGCTCATCTCAAAAACTACCCCCAGGGCCATGGAAGATACCTATTATAGGACACATACATCATCTAATTACCTCTACACCACATAGAAAATTAAGTGACTTGGCCAAAATATATGGACCCTTGATGCACCTACAACTTGGAGAAATCTCTACAATTGTTGTTTCCTCACCAAATTATGCTAGGGAGATACTTAAAACACATGATGTTATATTTGCATCTAGGCCTAAACTTCTAACTATAGAAATACTATTATATGGATACACAGATATTGCTTTTTCACCTTATGGAAATTATTGGAGACAACTAAGAAAAATATGCACAATGGAACTTTTCTCACAAAAACGGGTGAGTTCATTCCAACCTATAAGAGAAGAAGAGCTCACTGATCTCATCGAAAGGATTCATTCGCAGCAAGGGTCGCCCATCAACATCACTCAACTTGTAGTTTCATCAACATTTGCTATCATTTCAAGGGCTGCATTTGGCAACAAATATAAAGTCCAAGAGTTTGCATCATTGGGAAAGGGAGAATCAATTGCAGGAGGTTTTGAAATAGCAGAATTGTTTCCTTCAGCTAAATGGCTTCAACTTGTTTCTGGTTTGAGGCCTAAACTTGAGAGGTTGCATAGAAAAATCGATCAGATACTAGAAAACATCATCATTGAACATAAAGAAACAAATTCAAAAGCAAAAGAAGGCCAAGGTGAAAGAGAAGAAGATTTTGTAGATGTTCTTCTAAAATTCCAAGATACTAATGATGGTGACCAAGATATTTGCTTAACTGACAACAATATCAAGGCTATAATCATGGACATCTATGGTGCCGGAGGTGAAGGATCATCTTCGACCATAATTTGGGCAATAGCAGAGTTGGTAAGGGATCCAAGAGTGATGAAGAAAGCACAAGAAGAGATCAGAGAAATATTCAAAATGAAAGGAATTGTAGGTGAAAATTGTATAAATGAACTCAAATATTTGAAGTCCGTTGTGAAAGAAACCCTAAGGTTACACCCTCCAGGCGCTCTCTTAATTCCAAGAGAATGTGGTCAAGCATGTGAGATTGATGGGTATTATATACCAAACAAAAGCAAGGTGATAGTAAATGCATGGGCAATTGGAAGAGATCCAAAGTATTGGACCGAACCAGAGAGATTTTATCCAGAGAGATTCATTGGTAGCTCTATTGATTACAAAGGGAGTGATTTTGAGTACATTCCTTTCGGTGCTGGAAGAAGAATATGTCTAGGTAGCACATTTGCTTTGATAAATGTTGAGATGGCACTTGCATTGATGTTGTATCATTTTGATTGGAGGCTACCCAATGGAATGAAAGGTGAAGACTTGGACATGAGTGAACAATTTGGAATGAGTGTGAAAAGAAAAGATGACTTGTATTTGATACCCACAGCTCATATTCCTTCTTTGGCAATATAA 1530 0.3706 MDPNFFNLKVLSSFFIFMLVALKLGKMILNKKGSSQKLPPGPWKIPIIGHIHHLITSTPHRKLSDLAKIYGPLMHLQLGEISTIVVSSPNYAREILKTHDVIFASRPKLLTIEILLYGYTDIAFSPYGNYWRQLRKICTMELFSQKRVSSFQPIREEELTDLIERIHSQQGSPINITQLVVSSTFAIISRAAFGNKYKVQEFASLGKGESIAGGFEIAELFPSAKWLQLVSGLRPKLERLHRKIDQILENIIIEHKETNSKAKEGQGEREEDFVDVLLKFQDTNDGDQDICLTDNNIKAIIMDIYGAGGEGSSSTIIWAIAELVRDPRVMKKAQEEIREIFKMKGIVGENCINELKYLKSVVKETLRLHPPGALLIPRECGQACEIDGYYIPNKSKVIVNAWAIGRDPKYWTEPERFYPERFIGSSIDYKGSDFEYIPFGAGRRICLGSTFALINVEMALALMLYHFDWRLPNGMKGEDLDMSEQFGMSVKRKDDLYLIPTAHIPSLAI 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01323 509 CDD CYP71-like 70 496 - -
Trre2g01323 509 Gene3D Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 Pfam Cytochrome P450 39 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PANTHER CYTOCHROME P450 71B11-RELATED 20 501 - -
Trre2g01323 509 SUPERFAMILY Cytochrome P450 39 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 FunFam Cytochrome P450 71D8 31 500 - -
Trre2g01323 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Trre2g01323 509 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01323 509 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01323 Trre-Chr2 10618779 10620580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01323 14 501 Cytochrome P450 AT3G26300 42.886 9.84e-133 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01323 - - gmx:102665189 719.924