Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01321 ATGGATTCTCAAATTTTTGGCTTAATAGTCCTTGCCTCTTTTTTCCTCTTCATGCTTGTGGCACTGAAAATAGGGAAGATTCTCAACAAAAAAGGGTCACCTCCAAACCTACCCCCAGGACCATGGAAACTACCTATTATAGGACACATACATCATCTAATTACCTCTACACCACATAGAAAATTAAGTGACTTGGCCAAAATATATGGACCCTTGATGCACCTACAACTTGGAGAGATATCTGCAATTGTTGTTTCATCAGCAGAATATGCTAAAGAGATACTTAAAACACATGATGTCATATTTGCATCTAGGCCTAAACTTCTAGCTACAGAAATACTCAAGGATCGACCATCAACATTTGCTATCATTGCAAGGGCTGTGTTTGGCAACAAATGTAAAGTCCAAGAGTTTGTATCTTTGGAAAATGGAGAATCAATTGCAGGAGGTTTTGTCATAGCAGAATTGTTTCCTTCAGCTAAATGGCTTCAACGAGTTTCTGGTTATAGGCCTAAACTTGAGAGGTTTCATAGGCAAATCGATCAGATACTAGAAAACATCATCATTGAACATAAAGAATCAAAGTCAAAAGAAGGTGAAGGTGAAGTTGGAGAAGATCTGGTAGATGTTCTTCTAAAATTTCAAAGTGTGAATATCAAGGCTATAATCCTGAACATCTATGGTGCTGGAGGAAGAAGAATATGCCCAGGCAGCACATTTGGTTTGATAAATGTTGAGATGGCACTTGCATTAATGTTGTATCACTTCGATTGGAGACTTCCCGATGGAATTAAAGGTGAGGACTTGGACATGACTGAGCTATTTGGAGCGACCATCAAACGAAAAGATGACTTATATTTGATACCTACGGCTTATCTTCCTTCTGTGGCAATATAA 897 0.3835 MDSQIFGLIVLASFFLFMLVALKIGKILNKKGSPPNLPPGPWKLPIIGHIHHLITSTPHRKLSDLAKIYGPLMHLQLGEISAIVVSSAEYAKEILKTHDVIFASRPKLLATEILKDRPSTFAIIARAVFGNKCKVQEFVSLENGESIAGGFVIAELFPSAKWLQRVSGYRPKLERFHRQIDQILENIIIEHKESKSKEGEGEVGEDLVDVLLKFQSVNIKAIILNIYGAGGRRICPGSTFGLINVEMALALMLYHFDWRLPDGIKGEDLDMTELFGATIKRKDDLYLIPTAYLPSVAI 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01321 298 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01321 298 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01321 298 Gene3D Cytochrome P450 120 229 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01321 298 Gene3D Cytochrome P450 28 119 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01321 298 Gene3D Cytochrome P450 230 285 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01321 298 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 120 230 - -
Trre2g01321 298 Pfam Cytochrome P450 38 116 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01321 298 SUPERFAMILY Cytochrome P450 33 290 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01321 Trre-Chr2 10605960 10611353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01321 205 293 Cytochrome P450 AT3G48280 34.831 2.25e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01321 - - vri:117908144 181.8