Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01305 ATGACATCTTTAGAACAATCTTCCACAACCACCACCAACAACCACCAAGAGCTCCCACTAAAACCAATCCCAGGCAGCTATGGCCTCCCCTTCATTGGACCGATTTTCGACCGACACGACTATTTCTACAACCAAGGTAGAGACAAATTCTTCTCAACAAGAATTCAAAAATACAATTCAACAGTCTTTAGAACCAACATGCCACCAGGTCCATTCATAGCCTCAAACCCTAGAGTCATAGCTCTCTTAGACGCCGAATCCTTCCCGATCCTCTTCGACAATAAAAAAGTCGAGAAACACAATGTCTTCGACGGTACTTTCATGCCATCGACAAATTTCACCGGTGGCTACCGTATCTTGTCTCAATTAAACACAACCGAACCAAACCATGCTCTTATCAAAGGTTTATTGCTTAATGCACTTTTGTTGAGAAAAGACAATATTATCCCTCTTTTTAAGAGGATACTTTCTGATTCTTTTAGTAAGATTGAAGATGAAATTTATGGTAAAAGTGGTAAAGCAGATTTTAACACTATTTTTAGTGAAGCTTCTTTTAACTTCTTGTTTAATCTCTTTTGTGATAATAAGTATCCTTCTGAAACTAACCTTGGTTCTCAAGGTCCTAAAATGTTGGACTCATGGATTCTCTTTCAAATTGCTCCAATTGAAACATTAAAACCTCCTAAGATTTTCAATTATCTTGAAGATCTATTGCTTCGTACTGTTCCCATTCCAGCTTGTTTAACAAGGTCCTCTTACAAGAAGCTCTATGAAGCATTTTCTTCTTCGGCTGTAACAATTTTAGACGAAGCCGAAAAAGTAGGGTTGAAAAGAAGTGAAGCATGCCATAATCTCATTTTCATAGCAGGCTTCAATGGATATGCCGGATTGAAGAATCAATTTCCAACACTCTTCAAATGGATAGCTTTATCTGGTGAAGAGCTACACAAAGAAGTCGCAAACGAGATAAGAACCGTTGTAAAACAAGAAGGCGGAGTAACAATTCAATCATTGGAAAAAATGTCGTTAGTAAAATCTGTTATTTATGAAGCAATGCGAATAGCACCTGTTGTACCTTATCAATATGCAAAAGCAAGAGAAGATTTGATTGTCAAGAGTCATGATGCAAGTTTTGAAATAAAAAAGGGTGAGACGATATTTGGATATCAACCTTTTGCTACTAAGGATCCTAGGGTTTTCGATGATGCCGAGGTTTTCATTCCAAAGAGGTTTATTGGAGAAGGTGAGAAGTTGTTGAAGTATGTTTTATGGTCAAATGGGAGAGAAACAGAGAACCCTACTGTTGATAATAAACAATGTCCTGGGAAAAACCTTGTTGTGCTTTTGTGTAGATTATTTTTGGTGGAGTTTTTCTTGCGTTATGATACTTTTACTTTTGAGACTAAAGATGCTGCTGTTGGTGTTTCTATTACCATTACCTCTCTCACCAAGGCTTCTACTATCTAG 1467 0.3742 MTSLEQSSTTTTNNHQELPLKPIPGSYGLPFIGPIFDRHDYFYNQGRDKFFSTRIQKYNSTVFRTNMPPGPFIASNPRVIALLDAESFPILFDNKKVEKHNVFDGTFMPSTNFTGGYRILSQLNTTEPNHALIKGLLLNALLLRKDNIIPLFKRILSDSFSKIEDEIYGKSGKADFNTIFSEASFNFLFNLFCDNKYPSETNLGSQGPKMLDSWILFQIAPIETLKPPKIFNYLEDLLLRTVPIPACLTRSSYKKLYEAFSSSAVTILDEAEKVGLKRSEACHNLIFIAGFNGYAGLKNQFPTLFKWIALSGEELHKEVANEIRTVVKQEGGVTIQSLEKMSLVKSVIYEAMRIAPVVPYQYAKAREDLIVKSHDASFEIKKGETIFGYQPFATKDPRVFDDAEVFIPKRFIGEGEKLLKYVLWSNGRETENPTVDNKQCPGKNLVVLLCRLFLVEFFLRYDTFTFETKDAAVGVSITITSLTKASTI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01305 488 MobiDBLite consensus disorder prediction 1 21 - -
Trre2g01305 488 CDD CYP74 53 480 - -
Trre2g01305 488 Gene3D Cytochrome P450 14 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01305 488 SUPERFAMILY Cytochrome P450 19 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01305 488 FunFam Allene oxide synthase, chloroplastic 18 487 - -
Trre2g01305 488 Pfam Cytochrome P450 314 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01305 488 PANTHER CYTOCHROME P450 26 16 461 - -
Trre2g01305 488 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01305 Trre-Chr2 10485782 10487972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01305 8 486 Cytochrome P450 AT5G42650 49.272 6.51e-169 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01305 K01723 - gmx:100801764 714.146