Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01302 ATGTTGACAGCTGAGTTCTGGCGAGGAAGAGAGAGTTCCGGCGGAGAGAGTGGTCTCAGTTTCCGGAAAATCAGAGAATTTTTTTTGCTCTGTCAGATTCAGTCCTTCAAGAAGGGGAATCTCTCTTTGTTGTCTCAATCTCGGGATGATTATGCTGCTGATGACAATGAATACGAGGTTATGTGCAATTTAAGGTCGACGGCGAGGATGAATTACATTTGGAGATACAAGCTTCAGAGAGCTTCATTGCCTGAAGCAGAGAAGAAGAAGGAACAGAGTTTACCCTTTTATCAGCTTTTCTCATTTGCTGATAAATATGATTGGATTCTTATGATCTCAGGAAGTATTGGTGCCATTATTCATGGTTCATCTATGCCTGTTTTTTTTCTTCTTTTTGGTCAAATGGTTAATGGTTTTGGTAAAAACCGAATGGATTTGAAGAAAATGACTGATGGAGTTTCCAAGATGGAAGTGAGTAGAATGGATGAATCAGAACATATTCGTGGTGGTGATTGGCCGAAGGTGTTGAAAGAGCATGGTCTGGCCTGA 549 0.4098 MLTAEFWRGRESSGGESGLSFRKIREFFLLCQIQSFKKGNLSLLSQSRDDYAADDNEYEVMCNLRSTARMNYIWRYKLQRASLPEAEKKKEQSLPFYQLFSFADKYDWILMISGSIGAIIHGSSMPVFFLLFGQMVNGFGKNRMDLKKMTDGVSKMEVSRMDESEHIRGGDWPKVLKEHGLA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01302 182 PANTHER ABC TRANSPORTER B FAMILY 80 148 IPR039421 -
Trre2g01302 182 Gene3D ABC transporter type 1, transmembrane domain 89 168 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01302 Trre-Chr2 10440998 10445564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01302 85 175 Calmodulin-binding Proteins AT2G36910 35.165 4.47e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01302 K05658 - csav:115699259 134.806