Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01292 ATGGCTCACCATTTTTCTAATAAGGCCTTAGGTTGTTTTCTTTTCTTTTCTTTTCTTCTTTCTTCTTTTTCAACCTTAGGCCATAGTCATTTGATCCGTGATCCAATAGTGATTATTGGCGGTGGTGGTGAAATTATAATAGGAAATGAAAATGGTGATGCTCCGGTTCAATCGCCATCGCCATCAATAACCATAGGTTCTCCAACAATAACCATAGGTTCTCCAGCTCCTGCTCCAGCACCTAAAATTGAAATTGTAAATGATAATAATAAAAATAATAATGCTTGTGTCACAAGTTTTCCTAATGAGAGGCTAAGAAGTGCTTATATTGCATTTCAAGCATGGAAAGAGGCAATTTATTCAGACCCTTTTAACACAACTGGTGATTGGGTTGGTAATGATGTGTGTTCTTACACTGGTGTGTTTTGTGCACCTGCTCTTGATGATCCAACATTGAATGTTGTTGCTGGTGTTGATCTTAACCATGCCGACATTGCCGGTCATCTTCCAGAAGAGTTAGGATTATTGAATGATACTGCTCTTTTTCACATTAACTCAAACAGGTTTTGTGGTATTATTCCCGAGAGCTTTAAAAATCTCACCATTATGCATGAGTTTGATATTAGTAACAACCGTTTCGTCGGTGGTTTTCCTTATGTGGTATTCAAATGGCCATATTTGAAGTACTTAGATATTAGATACAATGACTTTGACGGATGTTTACCTCCCGAGCTTTTCGAGAAAGAACTCGATGCGATATTTTTGAACAATAACCGTTTCACATGTGGTATACCAGAAACACTTGGAAAATCAACAGCTTCTGTTGTGAGTTTTGCTAACAATAATTTCACAGGTTGTATTCCAAAATCAATTGGAAACATGGTGAACTTGAATGAGATTGTGTTATTGGATAATGGTCTTGGTGGTTGTTTACCACAAGAGATTGGTTTGTTAGAGAATGTAACTGTTTTTGATGCCAGCAATAATGGGTTTGTTGGGACTCTACCAAATTTATCAGGATTGAGGAATGTTGAGGTTATTGACATAGCGCACAACAAGCTTAGTGGATATGTTTCCAACACTATTTGCCAACTACCTTTGTTGAATAATTTCACATTCTCTCACAATTACTTTAATGGAGAAGCTCAAACTTGTATTCCCTCAAATAATTCTGATGTTGTATTTGATGATGCTGGAAATTGTTTACCTGGAAGGAAGAATCAAAAGACATATAAGCAATGTTTACCTGTTTTGACTAAACATGTGGATTGTAGCAAACATTGTGGTGCTGGAGGAAAAGGTAATAGTGATGCTCCATCAACACCAAAACCAACTCCATCAAACCCACCAAAGTCTCATCCTCCTACGGAAGAGACACCAAAGGCTCAACCACCACCAGTTTTGCCACCTGTTGAAGATATTCCACCAACTCTACCACCAGTTAAGGACATTCCACCAACAAGAGCACCAGTTGAGGACATTCCACCAACACTACCACCAGTTAAGGATATTCCACCAACAAGAGCACCTGTTGAGGACATTCCCCCTACACTACCACCAGTTGAAGATATTCCACCAACGCGTGCACCAATGTCATCACCACCACCACCCGTGATTTATGAATCACCCCCTACACCTGTCAATTCACCACCACCACCTGTCCACTCGCCTCCTCCACCAGTCCACTCTCCACCACCACCAGTTCATTCTCCTCCACCACCTGTTCACTCACCTCCTCCACCAGTCCACTCTCCACCACCACCACCACCAGTTCATTCTCCTCCACCACCTGTTCACTCACCTCCTCCACCAGTCCACTCCCCACCACCACCAGTTCATTCACCTCCTCCACCAGTCAACTCCCCACCACCACCAGTTCACTCTCCACCAGTTGAGGATATTCCACCAACAAGAGCGCCAGTTGAGGACATTCCACCAACAAGAGCACCAGTTAAGGACATTCCCCCTACACTACCACCGGTTAAAGATATTCCACCGACGCGTACACCAGTGTCATCACCACCACCACACGTCATTTACAAATCACCTCTCGTACCTATCAATTCACCACCACCACCAGTTCACTCTCCTCCACCACCTGTCTACTCACCTCCTCCACCACCGGTTCACTCACCTCCTCCACCAGTCCACTCTCCACCACCACCAATTCATTCTCCTCCACCACCTGTTCACTCACCTCCTCCACCAGTCCACTCTCCACCACCACCAGTTCATTCACCTCCTCCTCCGGTTCACTCTCCACCACCACCTGTCTACTCCCCACCACCGGTGTACTCTCCTCCACCACCCCCACCAGTCCATTCTCCTCCACCCCCCGTCAACTCTCCACCACCACCACCAACATGGGAAGACGTCATTTTGCCACCAATCTTTGGATCTGAATATAGGTCGCCTCCTCCCCCAACAATTGCTGGATACTAA 2442 0.4443 MAHHFSNKALGCFLFFSFLLSSFSTLGHSHLIRDPIVIIGGGGEIIIGNENGDAPVQSPSPSITIGSPTITIGSPAPAPAPKIEIVNDNNKNNNACVTSFPNERLRSAYIAFQAWKEAIYSDPFNTTGDWVGNDVCSYTGVFCAPALDDPTLNVVAGVDLNHADIAGHLPEELGLLNDTALFHINSNRFCGIIPESFKNLTIMHEFDISNNRFVGGFPYVVFKWPYLKYLDIRYNDFDGCLPPELFEKELDAIFLNNNRFTCGIPETLGKSTASVVSFANNNFTGCIPKSIGNMVNLNEIVLLDNGLGGCLPQEIGLLENVTVFDASNNGFVGTLPNLSGLRNVEVIDIAHNKLSGYVSNTICQLPLLNNFTFSHNYFNGEAQTCIPSNNSDVVFDDAGNCLPGRKNQKTYKQCLPVLTKHVDCSKHCGAGGKGNSDAPSTPKPTPSNPPKSHPPTEETPKAQPPPVLPPVEDIPPTLPPVKDIPPTRAPVEDIPPTLPPVKDIPPTRAPVEDIPPTLPPVEDIPPTRAPMSSPPPPVIYESPPTPVNSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVNSPPPPVHSPPVEDIPPTRAPVEDIPPTRAPVKDIPPTLPPVKDIPPTRTPVSSPPPHVIYKSPLVPINSPPPPVHSPPPPVYSPPPPPVHSPPPPVHSPPPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPVYSPPPPPPVHSPPPPVNSPPPPPTWEDVILPPIFGSEYRSPPPPTIAGY 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01292 813 PRINTS Proline rich extensin signature 540 557 - -
Trre2g01292 813 PRINTS Proline rich extensin signature 457 473 - -
Trre2g01292 813 PRINTS Proline rich extensin signature 483 495 - -
Trre2g01292 813 PRINTS Proline rich extensin signature 438 450 - -
Trre2g01292 813 PRINTS Proline rich extensin signature 519 535 - -
Trre2g01292 813 PRINTS Proline rich extensin signature 495 516 - -
Trre2g01292 813 Gene3D Ribonuclease Inhibitor 109 401 IPR032675 -
Trre2g01292 813 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 83 573 - -
Trre2g01292 813 MobiDBLite consensus disorder prediction 431 813 - -
Trre2g01292 813 SUPERFAMILY L domain-like 111 402 - -
Trre2g01292 813 FunFam Pollen-specific leucine-rich repeat extensin-like protein 1 108 406 - -
Trre2g01292 813 MobiDBLite consensus disorder prediction 442 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01292 Trre-Chr2 10389712 10392153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01292 1 430 Trihelix Transcription Factor Family AT3G19020 56.944 2.51e-170 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01292 - - lang:109330687 602.438