Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g01271 | ATGGCTATGGATGAAGTGGATAGTAGCTCTGAGTGGAGCAGGGAGCAAGACATAGCATTTGAGAATGCCTTGGCGACTTATCCTGAGGATGCTTCGGATCGATGGGAGAAGATTGCAGCTGATGTACCGGGGAAGACTGTGGAAGAAATTAAAGAGCATTATGAGCTCTTGGTTGATGATGTTAGCCAGATTGAAGCTGGTTGTGTGCCTCTACCGTCATATAATTCTTCTTCGGAGGGTTCAACAGGTCAAGCTAGTGATGAAGGAGTTGGGGGGAAAAAGAATGGGCACAATAACGAGTCTAACCATGGAACTAAGGCTTCAAGATCCGATCAAGAACGACGGAAGGGTATTGCTTGGACTGAAGAAGAGCACAGGTTATTTCTTCTTGGCCTGGACAAGTACGGAAAAGGTGATTGGCGAAGTATATCACGGAACTTTGTGGTGACCCGAACACCGACACAAGTAGCAAGCCATGCCCAAAAATACTTCATTCGATTGAACTCAATGAACAAAGACCGAAGGCGATCAAGCATACATGATATTACAAGTGTTAACAACGGAGATATCTCAACACCTCAAGGACCGATCACCGGTCAAACCAACGGTTCCGCTGGAAATTCTGCAAGCAAATCAGTCAAACAAGTTTCTCCTTCCACAACCGGGATACCAGGAGCAGGAATATATGCCGCCCCTACCATCGGACAACCTGTCGGAGGACCTTTAGTATCTGCTGTTGGCACCCCCGTGAATCTTTCTGCACCTCCACACATGGCGTATGGTATTCGAGCACCGGTTCCTGGCACCGTCGTACCTGGCGCACCAATGAACATGGTCCCTATGACATACCCTATGCCTCATACTTCTGGTCCTCACAGGTGA | 882 | 0.4796 | MAMDEVDSSSEWSREQDIAFENALATYPEDASDRWEKIAADVPGKTVEEIKEHYELLVDDVSQIEAGCVPLPSYNSSSEGSTGQASDEGVGGKKNGHNNESNHGTKASRSDQERRKGIAWTEEEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDISTPQGPITGQTNGSAGNSASKSVKQVSPSTTGIPGAGIYAAPTIGQPVGGPLVSAVGTPVNLSAPPHMAYGIRAPVPGTVVPGAPMNMVPMTYPMPHTSGPHR | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g01271 | 293 | MobiDBLite | consensus disorder prediction | 181 | 219 | - | - | |
Trre2g01271 | 293 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 116 | 166 | IPR006447 | GO:0003677 | |
Trre2g01271 | 293 | Gene3D | - | 118 | 170 | - | - | |
Trre2g01271 | 293 | CDD | SANT | 11 | 58 | IPR001005 | - | |
Trre2g01271 | 293 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 7 | 287 | - | - | |
Trre2g01271 | 293 | SUPERFAMILY | Homeodomain-like | 114 | 169 | IPR009057 | - | |
Trre2g01271 | 293 | Pfam | Myb-like DNA-binding domain | 119 | 164 | IPR001005 | - | |
Trre2g01271 | 293 | Pfam | Myb-like DNA-binding domain | 10 | 54 | IPR001005 | - | |
Trre2g01271 | 293 | ProSiteProfiles | Myb-like domain profile. | 10 | 58 | IPR001005 | - | |
Trre2g01271 | 293 | FunFam | Transcription factor SRM1 | 4 | 71 | - | - | |
Trre2g01271 | 293 | ProSiteProfiles | SANT domain profile. | 7 | 57 | IPR017884 | - | |
Trre2g01271 | 293 | SMART | sant | 116 | 166 | IPR001005 | - | |
Trre2g01271 | 293 | SMART | sant | 8 | 60 | IPR001005 | - | |
Trre2g01271 | 293 | CDD | SANT | 119 | 164 | IPR001005 | - | |
Trre2g01271 | 293 | Gene3D | - | 10 | 57 | - | - | |
Trre2g01271 | 293 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 111 | 168 | IPR017930 | - | |
Trre2g01271 | 293 | SUPERFAMILY | Homeodomain-like | 10 | 65 | IPR009057 | - | |
Trre2g01271 | 293 | MobiDBLite | consensus disorder prediction | 72 | 116 | - | - | |
Trre2g01271 | 293 | ProSiteProfiles | SANT domain profile. | 120 | 168 | IPR017884 | - | |
Trre2g01271 | 293 | MobiDBLite | consensus disorder prediction | 174 | 219 | - | - | |
Trre2g01271 | 293 | FunFam | transcription factor MYB1R1 | 118 | 169 | - | - | |
Trre2g01271 | 293 | ProSiteProfiles | Myb-like domain profile. | 112 | 164 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g01271 | Trre-Chr2 | 10187875 | 10191542 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Trre2g01271 | Myb_DNA-binding | 1.9e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g01271 | - | - | ccaj:109792793 | 513.457 |