Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01253 ATGGCTACCACATCCTCAACATTAGCGGAAAAAAATAAGGTTTTGTTCATAATGGGTGCAACTGGAACCGGAAAAACTAAACTTTCCATCAACTTAGGTACTCAATTCCTTTCTGAAATCATCAACTCTGACAAAATTCAAGTTTATAAGGGTCTTGACATTGTCACCAACAAGGTACCAGAATTCGAACGTTGTTCGATTCCACATCACATGTTAGGCATCATCGACGATCCTGATTATGATTTCACTGTGAATGATTTTTGCAAGCATGTACTTGAAGCTCTAGATCTCATAATTAAAAATGGACACCTACCTATTATTGTAGGAGGGTCGAATTCTTATCTACAAATATTAGTTGATAATGCATTTCGTTCAAAATATGATTGTTGTTTCATTTGGACCGATGTGTCTTTGCCTATTCTATTTCAATATTTAGACAAAAGAGTTGATGAAATGGTTGACGCTGGGTTGGTGGATGAGATTAGAGAATTTTTTGTACCTGGAGCAAACTGTGAAGCGGGGATTAGAAGGGCAATTGGGGTTTCTGAGCTCAATTATTATTTTAAGATAGAAAATGAAAAAGATATTGATGAGGATCAGAAGGAAAATATACTAAAGGAAGCAATTATAAAAACCAAACAAAACACTTGCAAATTGGCTGAAAATCAACTCTCCAAGATCCATAATATGGTTTATAATCTTGGATGGAAGATGAACAAAATTGATTCTACAAAAGTGTTTGAGGCCATTTTAAGTGGAGAAGATTATAAACATTTGTATCAAGAGATTGTGGTTAAGCCAAGTATTGAGATTGTGACTAGATTTCTAGAGGAGACAACTCATGCAACTTGA 852 0.3486 MATTSSTLAEKNKVLFIMGATGTGKTKLSINLGTQFLSEIINSDKIQVYKGLDIVTNKVPEFERCSIPHHMLGIIDDPDYDFTVNDFCKHVLEALDLIIKNGHLPIIVGGSNSYLQILVDNAFRSKYDCCFIWTDVSLPILFQYLDKRVDEMVDAGLVDEIREFFVPGANCEAGIRRAIGVSELNYYFKIENEKDIDEDQKENILKEAIIKTKQNTCKLAENQLSKIHNMVYNLGWKMNKIDSTKVFEAILSGEDYKHLYQEIVVKPSIEIVTRFLEETTHAT 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01253 283 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 11 276 IPR039657 -
Trre2g01253 283 FunFam Adenylate isopentenyltransferase 5, chloroplastic 138 238 - -
Trre2g01253 283 Gene3D - 11 276 IPR027417 -
Trre2g01253 283 Pfam IPP transferase 124 225 - -
Trre2g01253 283 Pfam IPP transferase 47 121 - -
Trre2g01253 283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 153 IPR027417 -
Trre2g01253 283 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 138 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01253 Trre-Chr2 10050573 10051424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01253 125 282 C2H2 Transcription Factor Family AT2G27760 33.333 2.85e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01253 K10760 - gmx:121173984 419.083