Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01252 ATGAGTGCCATTGGAATTTCAGGTTTGGCTCATTTGTTTGGCATCATATCCATCATACTCTTGCTTGTTTGGTTGGTGCATTACCGCGAGGGGATCGACTATGATTCCGATTATGGATTACGCGTTTTCGATGTACACCCTTTAATGATGTTCTTGGGCTTTATTTTCCTTGTTGGTGAAGCAATTATGGCATTCCAAACGGTACCAGGAGAAAGAAATAAGGGAAAGTTTGTTCATATGACACTTCACTTGATTGCTATTGTTTTAGGCATAGTTGGTTTGTGTGCTGTTTTCAAATTCCATAATATGAAAAACATTGCAGACCTTTACAGCCTTCATTCATGGATTGGTATTAGCACCTTCTGCTTGTTTGGTTTGCAGTGGCTATTTGGTTTGATTACATTCATGTTTCCTGGAGCACAACCTCCAACAAGAGCTAGAATGCTTCCATGGCATAGAGCAAGTGGTAGAGTTTTACTTTTCATGGCAATTTGTGCTGCAGAAACAGGATTGATGGAGAAGGCTGGTTTCTTGGATCTGAAGCCATATCATAGAGAAACTAACTTGGTCAACTTTACTGGTCTTTCAATTCTCTTGTTTGGAGTTTTTGTTAACATATCTGTTGGTGTTCGTTAA 636 0.3931 MSAIGISGLAHLFGIISIILLLVWLVHYREGIDYDSDYGLRVFDVHPLMMFLGFIFLVGEAIMAFQTVPGERNKGKFVHMTLHLIAIVLGIVGLCAVFKFHNMKNIADLYSLHSWIGISTFCLFGLQWLFGLITFMFPGAQPPTRARMLPWHRASGRVLLFMAICAAETGLMEKAGFLDLKPYHRETNLVNFTGLSILLFGVFVNISVGVR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01252 211 Pfam Eukaryotic cytochrome b561 45 177 IPR006593 -
Trre2g01252 211 FunFam Probable transmembrane ascorbate ferrireductase 3 1 211 - -
Trre2g01252 211 SMART 561_7 45 171 IPR006593 -
Trre2g01252 211 CDD Cyt_b561_ACYB-1_like 36 178 - -
Trre2g01252 211 Gene3D - 1 210 - -
Trre2g01252 211 ProSiteProfiles Cytochrome b561 domain profile. 9 209 IPR006593 -
Trre2g01252 211 PANTHER CYTOCHROME B561-RELATED 6 208 IPR043205 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01252 Trre-Chr2 10042209 10043737 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01252 9 210 Chloroplast and Mitochondria Gene Families AT1G14730 53.465 3.91e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01252 K08360 - gmx:100777650 315.464