Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01251 ATGTCAACCATGGAGCTTCCGGATTGTTACTATCCCATACCACCAATTAACATCACCCCATGTGCACCAACACCAAATCACACTCTCCATCTCAATAATCTTGATGATGAATTATACAAGAAATTTATACCTTATGTGTATATATTCAAGAAATCTGTGGGAATAGATACCTTGAAGTCTTCCCTATCAAGAGTTTTGGTGGATTACTATCCTTTTGCTGGTAGGTTTAGGACAAGCACTGAGGATGAGAACAAGTTGGTGGTGGATTGTAATGGAGAAGGTGCTTTGTTTGTTGAGGCTTCAATGGATATCACTGTTGAAGAATTACTCAAATCTTCCATGATGCCAAATAACTCATGGAAAAAGATCATTTATAATATGGAATCTAAAAATGCTGTAGATACTCCTCTTCTTATAATCCAGGTGACTAATCTTCGATGTGGAGGAATGATCTTGTGCGCATCAATCAACCATAGTTTGAGTGACGGCACCGGCGCATCACAATTTCTAAATGCTTGGGGTCAACTAACCCAAAAGCCCGATAGTAATTTGACGATTATACCCTCACATGATCGACAAGTATTGAATATTCAAGAATCCTCACAAGAAAATTTCACTCACCCAATATACATCAAAGAACCAACACACCCAAATTCCGAAACAAACCTTACGACGTGGTTTCTAACACAATCACTTGTTCCTACATCATTCATCTTCAGATTCGATAAAATTCTTCGCCTAAAGAAACAGTGTACAACATCATCGTTCAATCACATAACAAGCTTCGAAGCAATAACAGCGCACTTATGGCGCTCATTGGTGAAAGCAACTAAATTGTCCCTCTCTCGAACTGTGAAGCTTTGTTTCACCGTTAACTTTCGAAAGAAGATGAAACTTCTTCCAGAAGGGTATTATGGGAATGGATTTGTTCTCGCCGGTGTTGAGAGTATGGTGAAGGATTTAGTGGCTGCAAATAACCTAGATCATGGTGTGAAACTTGTGCAAAAAGCCAAAGCTAGTGTGGATGAAGAGTATGTTAAGTCAACAATTGTTGTGTTAAAGGACAAAAAGGTAATTCATGATGGTTCTATAAGCTTATATGTAACGCAATGGAATAGATTAGGGTTGGAAGATCTTGATTTTGGAGAAGGGAAACCTTTGCATTTAGGTCCTTTATCTGTTCAAATTTATTGTGTTTTTTTACCGGTTATTGGTGATCCTAATGCGGTTAGAGTGCTTTTATCAGTTCCAAAGAATATAGTGGAAAAGTTTCAACATTACATGATAGAGATAGAGTGTTGGGGAAAAGATGAATAA 1317 0.3781 MSTMELPDCYYPIPPINITPCAPTPNHTLHLNNLDDELYKKFIPYVYIFKKSVGIDTLKSSLSRVLVDYYPFAGRFRTSTEDENKLVVDCNGEGALFVEASMDITVEELLKSSMMPNNSWKKIIYNMESKNAVDTPLLIIQVTNLRCGGMILCASINHSLSDGTGASQFLNAWGQLTQKPDSNLTIIPSHDRQVLNIQESSQENFTHPIYIKEPTHPNSETNLTTWFLTQSLVPTSFIFRFDKILRLKKQCTTSSFNHITSFEAITAHLWRSLVKATKLSLSRTVKLCFTVNFRKKMKLLPEGYYGNGFVLAGVESMVKDLVAANNLDHGVKLVQKAKASVDEEYVKSTIVVLKDKKVIHDGSISLYVTQWNRLGLEDLDFGEGKPLHLGPLSVQIYCVFLPVIGDPNAVRVLLSVPKNIVEKFQHYMIEIECWGKDE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01251 438 Pfam Transferase family 18 428 - -
Trre2g01251 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 405 - -
Trre2g01251 438 Gene3D - 14 214 IPR023213 -
Trre2g01251 438 Gene3D - 229 431 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01251 Trre-Chr2 10027105 10028647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01251 18 431 Monolignol Biosynthesis Gene Families AT5G48930 26.196 1.60e-43 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01251 - - gmx:100797134 493.426