Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01249 ATGGTACGTGTTGCTTTTAATTCTACCAACAAAAACAAGATTTTTAATCTTCATCCACTTCTTATGGTAATTGGGTTTATCTTAGTAGGTGGAGAAGCTATCGTGGCATACAAGTCAATTCCTGGAAAAAGAAGCTCAGGAAAAGTGTTTCATCTTTTACTTCATCTAATAGCTCTAACATCAGGAATTTTAGGAATTGTTGTAATTTTCAAATATAAAAAAGAGACAGGTCTTTCTAATATGTTTACATTACACTCTTGGTTAGGCATCTCAGCAATCTCTGCATTTGGTTTGCAGTATATATTGGGCTTCTTTGCTTACTTCTTCCCAGGAGCAGAAGCATCTACAAGAGCTACACTTTTGCCATGGCACAAGTTTATAGGAATAGTGATCTTCTTGCTTGCAGTTGGTACAGCTGAGACGGGTTTGATTCAATATTCTGATTTTTTACAACTGTTTAGAAACCAAGAAGCACTAATAGTGAATTTCACTGGTCTATTGCTCTTTCTATTTTCTGTCTTTGTTGGTCTTTCTGTGATTCTCCCTAGAAATTACTAA 558 0.353 MVRVAFNSTNKNKIFNLHPLLMVIGFILVGGEAIVAYKSIPGKRSSGKVFHLLLHLIALTSGILGIVVIFKYKKETGLSNMFTLHSWLGISAISAFGLQYILGFFAYFFPGAEASTRATLLPWHKFIGIVIFLLAVGTAETGLIQYSDFLQLFRNQEALIVNFTGLLLFLFSVFVGLSVILPRNY 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01249 185 PANTHER CYTOCHROME B561-RELATED 4 181 IPR043205 GO:0016491
Trre2g01249 185 Pfam Eukaryotic cytochrome b561 17 145 IPR006593 -
Trre2g01249 185 CDD Cyt_b561_ACYB-1_like 8 151 - -
Trre2g01249 185 SMART 561_7 17 143 IPR006593 -
Trre2g01249 185 Gene3D - 2 185 - -
Trre2g01249 185 FunFam Cytochrome b reductase 1 3 185 - -
Trre2g01249 185 ProSiteProfiles Cytochrome b561 domain profile. 1 180 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01249 Trre-Chr2 10020837 10022956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01249 4 178 Chloroplast and Mitochondria Gene Families AT4G25570 45.810 1.41e-52 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01249 K08360 - gmx:100785824 268.47