Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01229 ATGGGTTTCAGAGTTTCCTACGTTCTTCAACTCATGGTGCTGTTTTTTCTAATATTTGTTTGTGCATGGTGTCAAGATGATGATATTGTGATGAAAAAGCTAAAAACTACAATATCAAAAACTGATCTTGATTGGTCAGACAAAGATTTTTGCAATTGGGAGAAAGTTAGTTGTAGTGGAACAAAAAGGGTCACTTCAATTGAACTTAGAAGTTCAAATGTTGAAGGTTATTTACCAAAAGAATTGGTGCAACTCACTGAGTTAACTTATTTTCGTTGCAGTGTAAATATTTTATCAGGAGATTTCCCTTACATGTCAAATTCCCTTCAGAAGTTGTATATTGACAGTAACAAATTCACTTCCATGCCAAGTGATTTCTTCACAAATATGAGTAATTTGATAGAGGTGAAAATTGATTCTAACCCTTTTTCTCAGTGGCAAATTCCTTCTAGTCTTAAGAATTGTTTGGCTCTTCAGACTTTTTCTGCTGTGAATGTTAGTTTTGTTGGTGAAATTCCTGAATTCTTTGGAAATTATACTTTTCCAAGTTTGATTACTTTGCAATTGTCTTTTAATTTTCTTGAAGGTAATTTGCCTAATAGTTTATCTGGTAGTTCAATACAAAACCTTTGGGTTAATGGTCAAAAGAGTAATAATCAACTCAATGGTACACTTTCTGTTTTACAAAATATGACTTCATTGCAACAAATTTGGGTTCATGGCAATTCGTTTACCGGTCCTATACCTGATTTTTCAAATCATGATCAATTGTTTGATGTTAGTTTGAGGGATAATAAGTTAACCGGTGTTGTGCCATCGTCTTTAACTAAACTTGAGAGTTTGAAAATTGTGAATTTGACAAATAATGATCTTCAAGGTTCACCTCCTAAGTTTCAAGATGGTGTTCAGGTTGATATGGATATGGATAAAGGGAGGCATAGCTTTTGCACTGAGGTTGTTGGTCAACCATGTAGTCAACTTGTTAATGTTTTGCTTACTGTTGTTGAACCTTTTGGTTATCCTCTTAAACTTGCTCAAAGTTGGCAAGGTAATGACCCTTGTCATGGTCCTAATTGGTTAGGGATTGTTTGTTCTTCTGGTGGTAACATTATCATTATTGACTTTGAAAATAAGGGTTTTTCTGGTAGTATATCTCCTAGTTTTGCAAGTCTTAGTTCTGTGACGAAGTTGCGTCTTGCTAACAATAATCTCACTGGTACTATACCTAAGGAACTTGCTAGTATGCCTGCTTTGAAATTGCTAGATGTTTCCAATAATTCGCTGTATGGTCAGATACCGTCGTTTCACACAGATGTGGTTGTTATCACCAGTGGGAATCCTGATATCGGAAAGGATAAACCTCGCGACTCTAGTTCAGGAGGTGAAGATAATAAGAAAATTCGTGTTGGAGCTATTGTTGGTATTGTGATGGGGATTGTTGGCTTACTTGGTGTAGGGGTTTTTTTATTTATTATGTATGGTAAAAGACATCATAAGCGCGACATCAAAGTTCAAACTCCAAATGCAATATTGGTACATCCTCGTCATTCTGGAGATGGAAATGTTGTGAAGATAAGTGTTGCTGCATCTGAAAGTGCTGGTGCTGTTGTTGTAGGAGGAACCGGTGGATTTAATTTATTGAGTAGTGTTCAAAATGTGGAAACTGGTAATATGGTATCTGACTTTGGATTGGTTCGACTTGCTCCAGAAGGACAATCCTCATTCCAGACTAGACTGGCCGGAACTTTTGGATATCTAGCACCAGAGTATGCAGTAACTGGACGAGTCACTACAAAGGTTGACATATACAGCTACGGCGTGATTCTTATGGAGATGATAACTGGAAGAAGAGCACTTGACAACAGCCAACCAGAGGAGAACATCCACCTTGTTGCATGGTTCCGCAGGATGCTATTGAACAAAGACTCGTTCGATAAGGTCATTGATCCAGCAATGAATATCAACGACGAAGGATTGAAGAGTTTGTGGACTATTGCAGGATTGGCCAGCCAGTGTTGTGCAAGAGAGCCTCATCAACGCCCCAACATGGGACACATAGTGAACGTCCTAGCACCTCTTGTCGAGATTTGGAAGCCAGCTGAACTTGATGCCGATGACATGTATGGGATTGACTTCGATATGAGTTTGCCTCAAGCATTAAGTAAGTGGCAGAATCTTGAAGGAATGAGCAACACGCTCGATGTTTCGTATTCTTCATCGATGGTTGATAGTTGTGCGAATACACAGTCAAGTATACCGCCTCGGTCTCCTGGATTTGTTAATTCCTTCACATCTGCTGATGCGCGATGA 2310 0.3844 MGFRVSYVLQLMVLFFLIFVCAWCQDDDIVMKKLKTTISKTDLDWSDKDFCNWEKVSCSGTKRVTSIELRSSNVEGYLPKELVQLTELTYFRCSVNILSGDFPYMSNSLQKLYIDSNKFTSMPSDFFTNMSNLIEVKIDSNPFSQWQIPSSLKNCLALQTFSAVNVSFVGEIPEFFGNYTFPSLITLQLSFNFLEGNLPNSLSGSSIQNLWVNGQKSNNQLNGTLSVLQNMTSLQQIWVHGNSFTGPIPDFSNHDQLFDVSLRDNKLTGVVPSSLTKLESLKIVNLTNNDLQGSPPKFQDGVQVDMDMDKGRHSFCTEVVGQPCSQLVNVLLTVVEPFGYPLKLAQSWQGNDPCHGPNWLGIVCSSGGNIIIIDFENKGFSGSISPSFASLSSVTKLRLANNNLTGTIPKELASMPALKLLDVSNNSLYGQIPSFHTDVVVITSGNPDIGKDKPRDSSSGGEDNKKIRVGAIVGIVMGIVGLLGVGVFLFIMYGKRHHKRDIKVQTPNAILVHPRHSGDGNVVKISVAASESAGAVVVGGTGGFNLLSSVQNVETGNMVSDFGLVRLAPEGQSSFQTRLAGTFGYLAPEYAVTGRVTTKVDIYSYGVILMEMITGRRALDNSQPEENIHLVAWFRRMLLNKDSFDKVIDPAMNINDEGLKSLWTIAGLASQCCAREPHQRPNMGHIVNVLAPLVEIWKPAELDADDMYGIDFDMSLPQALSKWQNLEGMSNTLDVSYSSSMVDSCANTQSSIPPRSPGFVNSFTSADAR 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01229 769 SUPERFAMILY L domain-like 44 435 - -
Trre2g01229 769 Pfam Leucine rich repeat N-terminal domain 44 59 IPR013210 -
Trre2g01229 769 Pfam Leucine rich repeat N-terminal domain 342 365 IPR013210 -
Trre2g01229 769 FunFam Leucine-rich repeat receptor-like kinase 326 452 - -
Trre2g01229 769 FunFam Receptor-like kinase TMK4 25 321 - -
Trre2g01229 769 ProSiteProfiles Protein kinase domain profile. 370 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01229 769 Gene3D Ribonuclease Inhibitor 327 453 IPR032675 -
Trre2g01229 769 Gene3D Ribonuclease Inhibitor 26 322 IPR032675 -
Trre2g01229 769 Gene3D Transferase(Phosphotransferase) domain 1 496 706 - -
Trre2g01229 769 PANTHER OSJNBA0070M12.3 PROTEIN 10 559 - -
Trre2g01229 769 Pfam Protein kinase domain 554 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01229 769 SUPERFAMILY Protein kinase-like (PK-like) 558 717 IPR011009 -
Trre2g01229 769 MobiDBLite consensus disorder prediction 748 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01229 Trre-Chr2 9879970 9883222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01229 559 690 Receptor kinase-like Gene Family AT4G02010 43.609 2.78e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Trre2g01229 Pkinase 1.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01229 - K00924 gmx:100776064 618.231