Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01225 ATGGACATACACATAGAATATTGGGTTTGGGCATTTGCTACTTTATTAGCATGCTATTTTTGTCTGAACAATTTTGTGTGGAGATTGAATGAGTGGTATTACAATATGAAACTAAGAAAGAAACAATACACTCTTCCTCCTGGTCATTTGGGATGGCCTCTTATAGGCAATATGTTAGCCTTTGTTAAAGATTTCAAATCTGGTCATCCTGATTCATTCATCAACAACCTTATTTCCAGATATGGACGAACTGGTATCTACAAGTCACACTTGTTTGGGAGTCCAAGTATCATCATTTGTGATGCCGATATGTGTAGGCGAGTGCTAACGGATGATGAGATTTTTAAAGTCGGTTATCCAAAATCCACACTAGAAGTGATTAGATGTAAATGCTTTTGGAGTTCATCTAGAGAAGAGCAAAAGCGTTTTAAACGTCTAATCTCTGTTCTTATTGTGGGTCACAATACATTAGAAATGTACCTAACTCGCATGGAAGACATCGTGATCAATTCTTTGGAGGAACTTTCTAGTATGAGTCACCCGGTTGATTTTTTGAAAGAGATGAAAAATATTTCCTTTAATATCATCATTGAAATTTTCATGGGCTCTTACAATCAACATATCATTACCAAAATAGGGAACTCTTTTACTGAAATTTATAGTGCTTTGTTCTCTATGCCCATTAACTTTCCTGGTTTTGCTTTCCATAAAGGACTCCTGGCACGTGAGAAGTTGGCCAAATTAATTAAACCAATTGTAGAAGAAAGGAGGTTGATGAAAAAAAATGGTGACAAAAAAGATTTACTTGATATTCTTTTGGAGTCGAGGGATGAAGATGGTTGGAAAGCTGAGGATGAGGACATTGTTGACATGATGATAGGGTTTGTACTTGCTGGTCATGAAGCCACAGCAACTGGTATGATGTGGTCAATTATATATCTTACACAAAATCCACATATCTTGAAAAAAGCAAAGGAGGAGCAGGATGAAATTATGAAGACAAGATTGCCCACACAAAAACAATTAAGTATTAAGGAGATTAAACAAATGGTTTATCTTTCTCATATAATCGACGAAATGTTACGAGTTGTCACTATTAACTTTGCAATGTTTCGGGAAGCAACTAGAGATGTTAATATTAATGGTTATATAATACCAAAAGGATGGAAAGTTCTCACTTGGGCAAGAGCTATTCATATGGATCCCACATATTATTCAAATCCGGTTGAATTTAATCCATCCAGATGGAATGATCACAATGCCAAAGTTGGGACTTTCCTTCCTTTTGGAGCTGGAAGTATGCACTGTCCTGGGAGTGACCTGGCAAAAATTGAAATTTCCATATTTCTACATTATTTTCTTCTGAATTACAAGTTGGAGCGAGTAAATCCAGAATGTCCTATTACTTGCTTACCATCATCCAAACCCAAAGACAATTGCCTTGCTAAGGTGATAAAGGTCTCAAGTGTTGGTGCATAG 1479 0.3631 MDIHIEYWVWAFATLLACYFCLNNFVWRLNEWYYNMKLRKKQYTLPPGHLGWPLIGNMLAFVKDFKSGHPDSFINNLISRYGRTGIYKSHLFGSPSIIICDADMCRRVLTDDEIFKVGYPKSTLEVIRCKCFWSSSREEQKRFKRLISVLIVGHNTLEMYLTRMEDIVINSLEELSSMSHPVDFLKEMKNISFNIIIEIFMGSYNQHIITKIGNSFTEIYSALFSMPINFPGFAFHKGLLAREKLAKLIKPIVEERRLMKKNGDKKDLLDILLESRDEDGWKAEDEDIVDMMIGFVLAGHEATATGMMWSIIYLTQNPHILKKAKEEQDEIMKTRLPTQKQLSIKEIKQMVYLSHIIDEMLRVVTINFAMFREATRDVNINGYIIPKGWKVLTWARAIHMDPTYYSNPVEFNPSRWNDHNAKVGTFLPFGAGSMHCPGSDLAKIEISIFLHYFLLNYKLERVNPECPITCLPSSKPKDNCLAKVIKVSSVGA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01225 492 PANTHER CYTOCHROME P450 26 41 472 - -
Trre2g01225 492 CDD CYP90-like 78 484 - -
Trre2g01225 492 Gene3D Cytochrome P450 35 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01225 492 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01225 492 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01225 492 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01225 492 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01225 492 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01225 492 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01225 492 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01225 492 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01225 492 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01225 492 Pfam Cytochrome P450 46 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01225 492 SUPERFAMILY Cytochrome P450 39 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01225 Trre-Chr2 9844826 9852009 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01225 12 487 Cytochrome P450 AT2G32440 47.182 8.90e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01225 K04123 K17875 ag:BAG68929 690.263