Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01222 ATGGAGATACACATAGAATATTGGGTTTGGACATTTGCTACTTTGTTAGTATGCTATTTTTGTGTGAACAATTTTGTATGGAGATTGAATGAGTGGTATTACAATATGAAAGTAAGAAAGAAACAATACCCTCTTCCTCCTGGACATTTGGGATGGCCTCTTATAGGCAATATGTTAGCTTTTATTAAAGATTTCAAATCTGGTCATCCTGATTCATTTATCAACAACCTTATTTCCAGATATGGACGACCTGGTATCTATAAGTCGCACTTATTTGGAAGTCCAAGTATCATCATTTGTGATGCCGATATGTGTAGGCAAGTTCTAATGGACCATGAGACATTTAAAATCGGTTATCCAAAATCCACTCTAGAAGTGATTAGATATAAATTCCTTTGGAGTTCATCTAGAGAGAAAAAACATTTTAAACGCTCTGTTCTTACTATGGGTCACAATACATTAGAAATGTACTTAACTAGCATGGAGGATATCGTGATTAATTCTTTGGAGGAACTTTCAAGTATGAATCACCCGGTTGATTTTTTGAAAGAGATGAAAAATATTTCCTTTAATTTAATCATTGAAATTTTCTTGGGATCTTACAATCAACATGTCATTACCAAAATAGGGAATTCTTTTACTGAAATTCATGGTGCTTTGTTCTCTATGCCCATTAACTTTCCTGGTTTTGCTTTTCATAAAGGACTCATGGCACATGAGAAGCTGGTCAAATTAATTAAACCAATTGTAGAAGAAAGGAGGTTGATGAAAAAAAATGGTGATAGAAAAGATTTACTTGATATGCTTTTGGAGCCGAGGGATGAAGATGGTTGGAGAGCTGAGGATGAGGACATTGTTGACATGATGATAGGGCTTGTACTTGCTGGTCATGAAGCCACGGCATATGGTATGATGTGGTCAATTATATATCTTACACAAAATCCACATATCTTGAAAAAAGCAAAGGAGGAGCAGGATGAAATTATGAAGACAAGATTGCCCACACAGAAACAATTAAGTATTAAGGAGATTAAAAAAATGGTTTATCTTTCTCATATAATCAATGAAATGTTACGACTTATCTCTTTTAACTTTGCATTTTTTCGGGAGGCAACTAAAGACGTGAATATGAATGGTTATATAATACCAAAAGGATGGAAAGTTCTCACTTGGGCAAGAGCTATTCATATGGATCCCACATATTATTCAAATCCGGATGAATTTAATCCATCTAGATGGAATGATCACAATACCAAAGTTGGAACTTTCCTTCCTTTTGGAGCTGGAAGTATGTACTGTCCAGGGAGTGACCTGGCAAAAATTGAAATTTCCATATTTCTACATTATTTTCTTCTGAATTACAAGCTGGAGCGAGTAAACCCAGAATGTCCTATTACTTGCTTACCAACATCCAAACCCACAGACAATTGCCTTGCTAAGGTGATAAAGGTCTCAAGTGTTGGCACATAG 1470 0.3531 MEIHIEYWVWTFATLLVCYFCVNNFVWRLNEWYYNMKVRKKQYPLPPGHLGWPLIGNMLAFIKDFKSGHPDSFINNLISRYGRPGIYKSHLFGSPSIIICDADMCRQVLMDHETFKIGYPKSTLEVIRYKFLWSSSREKKHFKRSVLTMGHNTLEMYLTSMEDIVINSLEELSSMNHPVDFLKEMKNISFNLIIEIFLGSYNQHVITKIGNSFTEIHGALFSMPINFPGFAFHKGLMAHEKLVKLIKPIVEERRLMKKNGDRKDLLDMLLEPRDEDGWRAEDEDIVDMMIGLVLAGHEATAYGMMWSIIYLTQNPHILKKAKEEQDEIMKTRLPTQKQLSIKEIKKMVYLSHIINEMLRLISFNFAFFREATKDVNMNGYIIPKGWKVLTWARAIHMDPTYYSNPDEFNPSRWNDHNTKVGTFLPFGAGSMYCPGSDLAKIEISIFLHYFLLNYKLERVNPECPITCLPTSKPTDNCLAKVIKVSSVGT 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01222 489 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01222 489 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01222 489 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01222 489 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01222 489 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01222 489 SUPERFAMILY Cytochrome P450 39 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01222 489 Pfam Cytochrome P450 46 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01222 489 Gene3D Cytochrome P450 34 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01222 489 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01222 489 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01222 489 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01222 489 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01222 489 PANTHER CYTOCHROME P450 26 41 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01222 Trre-Chr2 9829440 9835975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01222 12 484 Cytochrome P450 AT2G32440 45.929 4.45e-160 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01222 K04123 K17875 ag:BAG68929 659.062