Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01221 ATGGAAATACAATATTGGGTTTGGATGTATACCATTTTGTTTAGTTTGGTGGCAAGCTATTTTCTTCTGAGAAGTTTTATGTGGAGATTGAATGAGTGGTATTATAATATGATACTAAAAACGAAACAATACCCTCTTCCTCCTGGTCATTTAGGGTGGCCTCTTATTGGCAATATGTTGACCTTTTTTAAACATTTCTCATATGGTCATCCTAATTCATTCATCAACAATTTTATTTCAAAGTATGGAAGAACTGGTATCTATAAGGCGCACTTGTTTGGTAGTCCAAGTATCATCATTTGCGAGGCTGACATGTGTAGGCAAGTACTAGCCGATGATGTGACGTTTAAGTTTAGTTATCCGAAATCTACCGTAGAAGTGCTTAGGTATAAACCCTTTTGGAGTTTCTCCCGAAAAGAACACATGCGTTTTAGACGCCTAATCTCTCCTCTTACCATGGGATACAATAATATATTAGAAATATACCTAACACGCATTGAGGACATTATGATCAATTCGTTGGAGGAAATTTCTAGCATGAGTCACCCGATTGAGTTTTTAAAGGAGTTGAAGAATATTTCCTTTAATATCATTATTGATATTTTCATGGGATCTTACAATCAACACATCATCACCAAAATAGGGAATTCTTTTACTGATTTACACACTGCATTGTTCTCTATGCCTATTAACCTTCCCGGTTTTGCTTTTCGTAAGGGACTTATGGCACGTGAAAGGCTAGCCAAATTAATTCAGCCTATTGTAGAACAAAGAAGGTCGATGATAAAAAATGGTGACAAAAAAGATTTACTTGATATTCTTTTGGAATCGAGGGATGAAGATGGTTGGAAACCAGAGGATGGGGATATTATTGACATTTTGATAGCATTTGTACTTGCCGGTCATGAAAGTACAGCACATGCTATGATGTGGTCAATAATATACCTTGCACAAAATCCACATATCTTGAAAAAAGCCAAGGAGGAACAAGAGGAAATCATCAAGACAAGACCACCCACACAAATAAAATTAAGTTATGTAGAGATTAAAAACATGGTTTATCTTTCTCAAATAATCAATGAAATGTTACGCCATGCCAGTATTACCTTTGCACTTTTTCGAGAGGCAACTATAGATGTTAACATCAATGGTTATACAATACCAAAAGGATGGAAAGTGTTAATTTGGTTAAAAGCTATGCATTGGGATCCTACATATCATCCAAATCCAGATGAGTTTAATCCATCAAGATGGGATGATCATAATGTCAAACTTGGAACCTTTCTTCCTTTTGGAGCAGGAAGTAGGCAGTGCCCTGGGAATAACTTAGCCAAAATTGAAATTTATGTATTTTTACATCATTTCCTTCTCAATTACAAGTTGGAGCGAGTAAATCCAAATTGTCCAATTAAAAGCTTACCTTCACCAATGCCTATAGACAATTGTCTTGCTAAGGTGATAAAGGTATCCAGTTCATAA 1479 0.3563 MEIQYWVWMYTILFSLVASYFLLRSFMWRLNEWYYNMILKTKQYPLPPGHLGWPLIGNMLTFFKHFSYGHPNSFINNFISKYGRTGIYKAHLFGSPSIIICEADMCRQVLADDVTFKFSYPKSTVEVLRYKPFWSFSRKEHMRFRRLISPLTMGYNNILEIYLTRIEDIMINSLEEISSMSHPIEFLKELKNISFNIIIDIFMGSYNQHIITKIGNSFTDLHTALFSMPINLPGFAFRKGLMARERLAKLIQPIVEQRRSMIKNGDKKDLLDILLESRDEDGWKPEDGDIIDILIAFVLAGHESTAHAMMWSIIYLAQNPHILKKAKEEQEEIIKTRPPTQIKLSYVEIKNMVYLSQIINEMLRHASITFALFREATIDVNINGYTIPKGWKVLIWLKAMHWDPTYHPNPDEFNPSRWDDHNVKLGTFLPFGAGSRQCPGNNLAKIEIYVFLHHFLLNYKLERVNPNCPIKSLPSPMPIDNCLAKVIKVSSS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01221 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Trre2g01221 492 PANTHER CYTOCHROME P450 26 43 475 - -
Trre2g01221 492 Pfam Cytochrome P450 47 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01221 492 Gene3D Cytochrome P450 36 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01221 492 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01221 492 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01221 492 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01221 492 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01221 492 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01221 492 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01221 492 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01221 492 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01221 492 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01221 492 SUPERFAMILY Cytochrome P450 41 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01221 Trre-Chr2 9820832 9824477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01221 16 489 Cytochrome P450 AT2G32440 45.912 6.63e-158 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01221 K04123 K17875 ag:BAG68929 619.387