Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01220 ATGAAAGTAAGAAAGAAACAATACCCTCTTCCTCCTGGTCATTTGGGATGGCCTCTTATAGGCAATATGTTAGCTTTTATTAAAGATTTCAAATCTGGTCATCCTGATTCATTTATCAACAACCTTATTTCCAGATATGGACGAACCGGTATGTACAAGTCGCACTTGTTTGGGAGTCCAAGTATCATCATTTGTGATGCCGATATGTGTAGGCGAGTGCTAACGGACGATGAGACATTTAAAATTGGTTATCCAAAATCCACTCTAGAAGTGATTAAATGTAAATTCTTTTGGAGTTCTTCTAGAGAAGAGCAAAAGCGTTTTAAACGTCTACTCTCAGTTCTTACTATGGGCCAAAATACATTAGAAATGTACCTAACTCGCATGGAGGACATCGTGATTAATTATTTGGAGGAACTTTCTAGTATAAATCATCCGGTTGATTTTTTGAAACAAATGAAAAATATTTCTTTTAGCATCATCATTGAAATTTTCATGGGCTCTTACAATCAACACATCGTTACCAAAATAGAAACTTCTCTTACTGAAATGTATAGTGCTATGTTCTCTATGCCCATTAACTTTCCTGGTTTTGCTTTCCATAAAGGACTTCTGGCACGTGAGAAGCTAGCCAAATTAATTCAACCAATTGTAGAAGAAAGGAGAGATGAAGATGGTTGGAAACCAGAGTATGAGGACATTGTTGACATGATGATAGGGTTTGTACTTGCTGGTCATGAAAACACAGCTAATGGTCTTACCTGGTCAATTATATATCTTACACAAAATCCACATATCTTGAAAAAAGCAAAGGAGGAGCAAGAGGAAATTATGAAGACAAGATTGCCCACACAGAAACAATTAAGTATTAAGGAGATTAAAAAAATGGTTTATCTTTTTCATATAATCAACGAAATGTTACGACTTGTCAATATTAACTTTGCAAATTTTCGGGAGGCAACTAGAGATGTGAATATGAATGGTTATATAATACCAAAAGGATGGAAAGTTCTCACTTGGGCAAGAGCTATTCATATGGATCCTACATATTATTCAAATCCGGATGAATTTAATCCATCTAGATGGAATGATCACAATGCCAAAGTTGGGACCTTCATTCCTATTGGAGCCGGAAGTATGCACTGTCCTGGGAGGGAGTTGGCAAGAATTGAAATTTCCATATTTCTACATTATTTTCTTCTCAATTACAAGTTAGCTCTCATTTTCACATTTTTTATTAGTTCCAACTTTTATTACTTACAATACATTCACTCGAATTTGGAACATTTCCAGAAGTCATAG 1302 0.3525 MKVRKKQYPLPPGHLGWPLIGNMLAFIKDFKSGHPDSFINNLISRYGRTGMYKSHLFGSPSIIICDADMCRRVLTDDETFKIGYPKSTLEVIKCKFFWSSSREEQKRFKRLLSVLTMGQNTLEMYLTRMEDIVINYLEELSSINHPVDFLKQMKNISFSIIIEIFMGSYNQHIVTKIETSLTEMYSAMFSMPINFPGFAFHKGLLAREKLAKLIQPIVEERRDEDGWKPEYEDIVDMMIGFVLAGHENTANGLTWSIIYLTQNPHILKKAKEEQEEIMKTRLPTQKQLSIKEIKKMVYLFHIINEMLRLVNINFANFREATRDVNMNGYIIPKGWKVLTWARAIHMDPTYYSNPDEFNPSRWNDHNAKVGTFIPIGAGSMHCPGRELARIEISIFLHYFLLNYKLALIFTFFISSNFYYLQYIHSNLEHFQKS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01220 433 SUPERFAMILY Cytochrome P450 5 411 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01220 433 PANTHER CYTOCHROME P450 26 6 405 - -
Trre2g01220 433 PRINTS P450 superfamily signature 244 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01220 433 PRINTS P450 superfamily signature 301 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01220 433 PRINTS P450 superfamily signature 373 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01220 433 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01220 433 Gene3D Cytochrome P450 1 412 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01220 433 PRINTS E-class P450 group I signature 233 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01220 433 PRINTS E-class P450 group I signature 372 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01220 433 PRINTS E-class P450 group I signature 340 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01220 433 PRINTS E-class P450 group I signature 382 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01220 433 PRINTS E-class P450 group I signature 253 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01220 433 Pfam Cytochrome P450 11 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g01220 433 Pfam Cytochrome P450 209 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01220 Trre-Chr2 9812042 9815122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01220 2 405 Cytochrome P450 AT2G32440 44.601 2.40e-135 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01220 K04123 K17875 ag:BAG68929 553.903