Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01212 ATGATAATCAGATCCAGAAATTTGAAACGCAAGCTTCCACAGGAAGCACCATTGCACGTCGTCAGCAAGAAGCTCCGGTCAAAGATTCCTCGCCGGAGAAGACGTCAGATCTCACCCGTGCTAGTTGTTTCACCGAGATTCAAAGTTTATGGAGAGAGACGGAATTTCTCTGTTATTTCAGTTGATTCGAGTTCGAGCTCCGGTTCGGATTTCGCCGGCGGCGAAGTTTCAGTTTCAGTTTCGTGTGATTCGAGTAGGATTTCTGCTGTTTTGTCCGGTATACGAAGAACGAGATCGATAAATGAGATTTCAAGCGGAGTTGAAAGTGTTCGGAAGAGAGAATGTGTTAGTTTGTTGAGGAATCGGAGTTTTGAGAAACGAAATGAAAACGAAGTGGAAGTTTCGGAGACTTCGTGTGTGGATTCTAATTCTGGAGCTCGTGATCGGAGTAGAAGCTTGATTTTGAAGTTTAAGAGTGGAAAAGAGAACGATGAAGTTTCGAAAGTTACTTTTGCGGAGAATTCAAAATCGAGTAACGGTAATTTGAATATCTCGTCGGAGATAACACGAAACGATGTCGTTTCGGTTAGTTCTGGTGCTCCAGAAACGTCGTTTATGGAGGAGAAGAGTAAAATCAACGAAAACAGAGCATCGGAATCTGAATTTTCTCAAATTTCGAGAAACCGTAACGCTGATGAGAATTGTACCGATTTGCTAGCGCAATCGATTATGAAGAATTGTTCTGATAATTCAGGTTACGATTCCGATCTAGCTTGCTCTGAGCAATTCTACGAGGATGATGATTCAGAGTACTGTTCAAGTCAGGGAACTACATTCTCTGATCTTCACTCTGAGATTTTCGGCGAATGTTCCGATTACAGTCCATCTCAGTTCCTTGATTCTGGAAGTCAGTTTTCGCAGGGATCAGTTGGTGAAACTCCTTCTCATACTTATGCTTTGTTCCTTCGATTCCGCGACGAATTCATGATGCTAAGTTCTCCGGTCAATAATTCTTCAAGTGTTGAAGAAGAAGTTTCTCTTCAACGCAATTTTTCAAGGTTTGAAGATTTGGATGATGAAGACAGTTACCAGATGCTTAGAAAGAGAGAACGGAGGCAAGTTTTCATGTGGAATTATGCTGAAAGATATTTCTCTACAACGAAATTCACCGACCTTGTGTTTCAGCAACGCTCAAAAATGGTTCACTGGATCGTTGAGCAATCTTATCGGAAACAACTTCGACAAGAAACAATGTTTCTTGGAATCAACCTACTTGACCGTTTCCTGAGCAAGGGATACTTCAAAGCAGAAAGAAACCTTCAAATTGTTGGAATAGCATGCCTTACATTGGCAACTAGAATTGAAGAAAACCAGCAATATAACAGAGTGGGGCAAAAAAATTTCTACATAGAAAAAAGTGCATACAGTAGATGCGAAGTGGTGGCTATGGAATGGATGGTGCAGGAGGTGCTCAATTTCGAGTGTTTTCATCCAACCATCTACAATTTCTTGAGCTTCTACCTAAAAGCTGCTAATGCTGATGCTGTTGTGGAGAAAAGGGTCACCTGCCTAGCATTACTGGCTCTGGCAGGTCCTAGTCAGCTGTGTTACTGGCCCTCAACTATTGCCGCTGCAGTTGTAATCCTGGCTTGTCTAGAACTCAATCAGAAAGCATCCCACAAAGTCATAGGGATCCACATTAGATCAAAGGATGAGAATCTGCACGAATGCATGGAGAGTCTGGAATGGTTGTTACGCTATCTATGA 1767 0.4211 MIIRSRNLKRKLPQEAPLHVVSKKLRSKIPRRRRRQISPVLVVSPRFKVYGERRNFSVISVDSSSSSGSDFAGGEVSVSVSCDSSRISAVLSGIRRTRSINEISSGVESVRKRECVSLLRNRSFEKRNENEVEVSETSCVDSNSGARDRSRSLILKFKSGKENDEVSKVTFAENSKSSNGNLNISSEITRNDVVSVSSGAPETSFMEEKSKINENRASESEFSQISRNRNADENCTDLLAQSIMKNCSDNSGYDSDLACSEQFYEDDDSEYCSSQGTTFSDLHSEIFGECSDYSPSQFLDSGSQFSQGSVGETPSHTYALFLRFRDEFMMLSSPVNNSSSVEEEVSLQRNFSRFEDLDDEDSYQMLRKRERRQVFMWNYAERYFSTTKFTDLVFQQRSKMVHWIVEQSYRKQLRQETMFLGINLLDRFLSKGYFKAERNLQIVGIACLTLATRIEENQQYNRVGQKNFYIEKSAYSRCEVVAMEWMVQEVLNFECFHPTIYNFLSFYLKAANADAVVEKRVTCLALLALAGPSQLCYWPSTIAAAVVILACLELNQKASHKVIGIHIRSKDENLHECMESLEWLLRYL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01212 588 MobiDBLite consensus disorder prediction 200 225 - -
Trre2g01212 588 SUPERFAMILY Cyclin-like 498 585 IPR036915 -
Trre2g01212 588 Pfam Cyclin, N-terminal domain 382 494 IPR006671 -
Trre2g01212 588 SUPERFAMILY Cyclin-like 357 494 IPR036915 -
Trre2g01212 588 Gene3D - 491 587 - -
Trre2g01212 588 PANTHER CYCLINS 338 581 IPR039361 -
Trre2g01212 588 SMART cyclin_7 402 489 IPR013763 -
Trre2g01212 588 Pfam Cyclin, C-terminal domain 498 582 IPR004367 -
Trre2g01212 588 ProSitePatterns Cyclins signature. 397 428 IPR006671 -
Trre2g01212 588 Gene3D - 376 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01212 Trre-Chr2 9773340 9777580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01212 361 556 Core Cell Cycle Gene Families AT5G11300 33.663 4.30e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01212 K21777 - gmx:100817658 632.098