Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01208 ATGGAGGGTAAAGAAATAGGAGGAAGAAATGTTGAGGGAATTAATGTAGGAAAAAAAAATGAAAATGAAAATGATGAAGAGATTCTTAAGAAGATTGTTGCAAGTCATCCTTTGTTTGAAGTTATGATTGAGTCTCACATCAATTGTTTGAAGGTTGGATCTGAGGATGGAGGGATTGACATTATAAGTGATGCATGGAAGAAATTGGTCAACACAAAGTCTAAAGCAGCGATTAGTCCAAACACTTCAGAGCTTGATCATTTCATGGAAGCATATTGCATGGCACTGAGTAACCTCAAAGAAGTGATAGAAGAACCAACAAAAGAAGCAAAATCTTTCATCAATGCCACATACATTCAACTGCAGGAACTCAATGAACCAAATAATGAACCCTCAACTTAA 402 0.3582 MEGKEIGGRNVEGINVGKKNENENDEEILKKIVASHPLFEVMIESHINCLKVGSEDGGIDIISDAWKKLVNTKSKAAISPNTSELDHFMEAYCMALSNLKEVIEEPTKEAKSFINATYIQLQELNEPNNEPST 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01208 133 SMART KNOX1_2 27 71 IPR005540 GO:0003677|GO:0005634
Trre2g01208 133 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 1 129 - -
Trre2g01208 133 SMART KNOX2_2 74 126 IPR005541 GO:0003677|GO:0005634
Trre2g01208 133 Pfam KNOX2 domain 83 124 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01208 Trre-Chr2 9759347 9760978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01208 24 124 Homeobox Transcription Factor Family AT4G08150 30.476 1.75e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01208 - - tpra:123892941 239.58